Gene Ava_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4472 
Symbol 
ID3680328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5598142 
End bp5598450 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content49% 
IMG OID637719827 
Productmicrocompartments protein 
Protein accessionYP_324965 
Protein GI75910669 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.518185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTG CAGTTGGAAT GATTGAGACT AAAGGCTTTC CCGCAGTAGT AGAAGCTGCT 
GACGCGATGG TGAAAGCTGC CCGTGTAACT TTGGTAGGAT ATGAAAAAAT TGGTAGTGCT
AGAGTCACCG TAATTGTGCG GGGGGATGTC TCTGAGGTAC AAGCCTCCGT AGCTGCTGGC
ATTGAAGCCG CCAGAAGAGT AAATGGTGGT GAAGTAGTAT CTACCCACAT CATTGCTCGC
CCCCACGAAA ACCTGGAATA TGTCTTACCG ATTCGGTACA CAGAAGCCGT AGAACAGTTC
CGCACCTAA
 
Protein sequence
MPIAVGMIET KGFPAVVEAA DAMVKAARVT LVGYEKIGSA RVTVIVRGDV SEVQASVAAG 
IEAARRVNGG EVVSTHIIAR PHENLEYVLP IRYTEAVEQF RT