Gene Ava_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4471 
Symbol 
ID3680327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5597616 
End bp5597960 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID637719826 
Productmicrocompartments protein 
Protein accessionYP_324964 
Protein GI75910668 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.261458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTG CAGTGGGAAT GGTAGAAACG CTAGGCTTTC CAGCAGTGGT AGAAGCAGCA 
GACGCAATGG TGAAAGCCGC TCGTGTCACT CTAGTAGGCT ACGAGAAAAT CGGTAGTGGT
CGGGTAACAG TAATCGTTAG AGGCGATGTG TCTGAAGTAC AAGCATCTGT AGCCGCAGGT
GTGGAATCAG TTAAGCGCGT CAACGGCGGA CAAGTATTGT CTACACACAT CATTGCTCGT
CCTCACGAAA ACTTAGAATA CGTCCTGCCA ATTCGTTATA CCGAAGATGT AGAACAGTTT
CGGGAAAATG TGAACGCAAT TCGTCCTTTC GGCAGAAGAC CATAA
 
Protein sequence
MSIAVGMVET LGFPAVVEAA DAMVKAARVT LVGYEKIGSG RVTVIVRGDV SEVQASVAAG 
VESVKRVNGG QVLSTHIIAR PHENLEYVLP IRYTEDVEQF RENVNAIRPF GRRP