Gene Ava_4467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4467 
Symbol 
ID3680323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5593681 
End bp5594463 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID637719822 
Productmicrocompartments protein 
Protein accessionYP_324960 
Protein GI75910664 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.625147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATC AGCGATCTAC TAACACAAAC CGGACATATC GTCGTCAAGA CGACCTCAGG 
GATACAGCCT TGGGGTTAGT CTCTACTCTT AGTTTTCCGG CGATCGTCGG CACAGCTGAC
ATGATGTTGA AATCAGCTGG GGTTCACCTG GTTGGTTATG AAAAAATTGG TAGTGGTCAC
TGTACGGCGA TCGTCCGGGG TGGAATTGCT GATGTTCGTT TGGCTGTAGA ATCCGGTGTG
CAAACTGCTG AACAGTTTGG ACAACTGGTT TCTAGCTTGG TGATTCCCCG ACCTTTTCCT
AATCTTGATG TCGTGTTGCC CATTACTAAC CGCCTGAGCC AGTTAATGGA GGAAGGTACA
TACAGCCGCT TGAGTAACCA AGCCATTGGT TTAGTAGAAA CGCGGGGCTT TCCAGCAATG
GTAGGTGCTT GTGATGCCAT GCTTAAATCG GCTGATGTCC AATTGGCATC CTATGAAAAA
ATTGGTGCAG GCTTGTGTAC AGCCATTATT CGTGGGTCTG TTGCTAACGT CGCAGTTGCA
GTGGAAGCAG GAATGTTTGA GGCTGAACGA ATTGGGGAAC TGAACGCAGT GATGGTAATT
CCTCGCCCAC TAGATGAATT GGAGCAAACC TTGCCGATCG CTAGTTGTTG GATAGAGCAT
CAGCAACCGT TGAGATTGCC GGTGAACATT AGAGAGCAAG TTGCCGAAAG GGAAGTGTTA
CAGTTACCAG ACTTAGCCGC TTTGCCTATG AAAATCACAG AAGAAGTATG GAACGATGAA
TGA
 
Protein sequence
MYNQRSTNTN RTYRRQDDLR DTALGLVSTL SFPAIVGTAD MMLKSAGVHL VGYEKIGSGH 
CTAIVRGGIA DVRLAVESGV QTAEQFGQLV SSLVIPRPFP NLDVVLPITN RLSQLMEEGT
YSRLSNQAIG LVETRGFPAM VGACDAMLKS ADVQLASYEK IGAGLCTAII RGSVANVAVA
VEAGMFEAER IGELNAVMVI PRPLDELEQT LPIASCWIEH QQPLRLPVNI REQVAEREVL
QLPDLAALPM KITEEVWNDE