Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4467 |
Symbol | |
ID | 3680323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5593681 |
End bp | 5594463 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637719822 |
Product | microcompartments protein |
Protein accession | YP_324960 |
Protein GI | 75910664 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.625147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAATC AGCGATCTAC TAACACAAAC CGGACATATC GTCGTCAAGA CGACCTCAGG GATACAGCCT TGGGGTTAGT CTCTACTCTT AGTTTTCCGG CGATCGTCGG CACAGCTGAC ATGATGTTGA AATCAGCTGG GGTTCACCTG GTTGGTTATG AAAAAATTGG TAGTGGTCAC TGTACGGCGA TCGTCCGGGG TGGAATTGCT GATGTTCGTT TGGCTGTAGA ATCCGGTGTG CAAACTGCTG AACAGTTTGG ACAACTGGTT TCTAGCTTGG TGATTCCCCG ACCTTTTCCT AATCTTGATG TCGTGTTGCC CATTACTAAC CGCCTGAGCC AGTTAATGGA GGAAGGTACA TACAGCCGCT TGAGTAACCA AGCCATTGGT TTAGTAGAAA CGCGGGGCTT TCCAGCAATG GTAGGTGCTT GTGATGCCAT GCTTAAATCG GCTGATGTCC AATTGGCATC CTATGAAAAA ATTGGTGCAG GCTTGTGTAC AGCCATTATT CGTGGGTCTG TTGCTAACGT CGCAGTTGCA GTGGAAGCAG GAATGTTTGA GGCTGAACGA ATTGGGGAAC TGAACGCAGT GATGGTAATT CCTCGCCCAC TAGATGAATT GGAGCAAACC TTGCCGATCG CTAGTTGTTG GATAGAGCAT CAGCAACCGT TGAGATTGCC GGTGAACATT AGAGAGCAAG TTGCCGAAAG GGAAGTGTTA CAGTTACCAG ACTTAGCCGC TTTGCCTATG AAAATCACAG AAGAAGTATG GAACGATGAA TGA
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Protein sequence | MYNQRSTNTN RTYRRQDDLR DTALGLVSTL SFPAIVGTAD MMLKSAGVHL VGYEKIGSGH CTAIVRGGIA DVRLAVESGV QTAEQFGQLV SSLVIPRPFP NLDVVLPITN RLSQLMEEGT YSRLSNQAIG LVETRGFPAM VGACDAMLKS ADVQLASYEK IGAGLCTAII RGSVANVAVA VEAGMFEAER IGELNAVMVI PRPLDELEQT LPIASCWIEH QQPLRLPVNI REQVAEREVL QLPDLAALPM KITEEVWNDE
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