Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4466 |
Symbol | |
ID | 3680322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5592298 |
End bp | 5593248 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719821 |
Product | LysR family transcriptional regulator |
Protein accession | YP_324959 |
Protein GI | 75910663 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCAAG CAACGCTACA CCAGTTGAAG GTGTTCGAGG CGGCGGCACG GCACGGTAGC TTTACTCGTG CTGCTGAGGA GTTATTTCTC ACCCAACCTA CCGTCTCTAT GCAAATCAAA CAGCTGACAA AATCTGTAGG TTTACCACTA TTTGAGCAGG TGGGAAAGCG CCTATATTTG ACCGAAGCAG GACGAGAATT ATTCGCAACC TGTCGGCAAA TATTTGAGAC TATTGCCCAG TTTGAAATGA AAGTAGCTGA TTTAAAAGGG CTAAAACAAG GGCAATTAAG ATTAGCAGTA ATCACCACTG CTAAATATTT TATTCCCCGC TTATTGGGGC CTTTTTGCCA ACTTTATCCA GGCATTGACA TTTCATTACA AGTCACGAAC CACGAACGCA TCCTAGAGCG GATGATGAGT AATATGGATG ACTTGTATAT TATGAGTCAA GTCCCAGAGC ATTTGGATGT AACTAGTCAG CCATTTTTAG ATAATCCTTT AGTAGTATTT GCTCCCGCAA ATCATCCACT AGCACAAGAA AAAAATATTC CCATACAACG GTTGTCCAAT GAACCCTTTA TTATGCGGGA GCCAGGTTCG GGAACACGCC GTGCTGTACA AAATCTGCTG GAAGAACAAG GTATTTCCGT AAAAGTGAAG CTGGAATTAG GTAGTAATGA GGCAATCAAA CAAGCGATCG CCGGTGGACT GGGAATTTCT GTTTTATCTC GACATACCCT ATTGTCTGAT GCCGCCGAAT TCAGCATTCT GGACGTGCAG CACTTCCCCA TTAAGCGGAC TTGGTACATG GTTTACCCGT CTGGCAAACA GTTATCTATT GTGGCTCGTA CCTACTACGA GTATTTGCTA GATGCAGCCA AAAAGTTTGT AGAGCAAACA GAGCAACTAA ATTTCCCTGT TCCTGTGCCT GAGTATAGTG TAGTTGAGTA A
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Protein sequence | MNQATLHQLK VFEAAARHGS FTRAAEELFL TQPTVSMQIK QLTKSVGLPL FEQVGKRLYL TEAGRELFAT CRQIFETIAQ FEMKVADLKG LKQGQLRLAV ITTAKYFIPR LLGPFCQLYP GIDISLQVTN HERILERMMS NMDDLYIMSQ VPEHLDVTSQ PFLDNPLVVF APANHPLAQE KNIPIQRLSN EPFIMREPGS GTRRAVQNLL EEQGISVKVK LELGSNEAIK QAIAGGLGIS VLSRHTLLSD AAEFSILDVQ HFPIKRTWYM VYPSGKQLSI VARTYYEYLL DAAKKFVEQT EQLNFPVPVP EYSVVE
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