Gene Ava_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4466 
Symbol 
ID3680322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5592298 
End bp5593248 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content44% 
IMG OID637719821 
ProductLysR family transcriptional regulator 
Protein accessionYP_324959 
Protein GI75910663 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCAAG CAACGCTACA CCAGTTGAAG GTGTTCGAGG CGGCGGCACG GCACGGTAGC 
TTTACTCGTG CTGCTGAGGA GTTATTTCTC ACCCAACCTA CCGTCTCTAT GCAAATCAAA
CAGCTGACAA AATCTGTAGG TTTACCACTA TTTGAGCAGG TGGGAAAGCG CCTATATTTG
ACCGAAGCAG GACGAGAATT ATTCGCAACC TGTCGGCAAA TATTTGAGAC TATTGCCCAG
TTTGAAATGA AAGTAGCTGA TTTAAAAGGG CTAAAACAAG GGCAATTAAG ATTAGCAGTA
ATCACCACTG CTAAATATTT TATTCCCCGC TTATTGGGGC CTTTTTGCCA ACTTTATCCA
GGCATTGACA TTTCATTACA AGTCACGAAC CACGAACGCA TCCTAGAGCG GATGATGAGT
AATATGGATG ACTTGTATAT TATGAGTCAA GTCCCAGAGC ATTTGGATGT AACTAGTCAG
CCATTTTTAG ATAATCCTTT AGTAGTATTT GCTCCCGCAA ATCATCCACT AGCACAAGAA
AAAAATATTC CCATACAACG GTTGTCCAAT GAACCCTTTA TTATGCGGGA GCCAGGTTCG
GGAACACGCC GTGCTGTACA AAATCTGCTG GAAGAACAAG GTATTTCCGT AAAAGTGAAG
CTGGAATTAG GTAGTAATGA GGCAATCAAA CAAGCGATCG CCGGTGGACT GGGAATTTCT
GTTTTATCTC GACATACCCT ATTGTCTGAT GCCGCCGAAT TCAGCATTCT GGACGTGCAG
CACTTCCCCA TTAAGCGGAC TTGGTACATG GTTTACCCGT CTGGCAAACA GTTATCTATT
GTGGCTCGTA CCTACTACGA GTATTTGCTA GATGCAGCCA AAAAGTTTGT AGAGCAAACA
GAGCAACTAA ATTTCCCTGT TCCTGTGCCT GAGTATAGTG TAGTTGAGTA A
 
Protein sequence
MNQATLHQLK VFEAAARHGS FTRAAEELFL TQPTVSMQIK QLTKSVGLPL FEQVGKRLYL 
TEAGRELFAT CRQIFETIAQ FEMKVADLKG LKQGQLRLAV ITTAKYFIPR LLGPFCQLYP
GIDISLQVTN HERILERMMS NMDDLYIMSQ VPEHLDVTSQ PFLDNPLVVF APANHPLAQE
KNIPIQRLSN EPFIMREPGS GTRRAVQNLL EEQGISVKVK LELGSNEAIK QAIAGGLGIS
VLSRHTLLSD AAEFSILDVQ HFPIKRTWYM VYPSGKQLSI VARTYYEYLL DAAKKFVEQT
EQLNFPVPVP EYSVVE