| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4465 |
|---|
| Symbol | |
|---|
| ID | 3680400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5590477 |
|---|
| End bp | 5592114 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637719820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324958 |
|---|
| Protein GI | 75910662 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02231] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAACC CAGAAGAAAC ACCATCTTGG CGAACAACAG TACACAGTCA GATTGTAGCG
GTGACAGTCT ACAGTGACAA AGCCTTAGTT ACAAGGAAGG GTAAGGTTTC CTTGTTAGGA
ACAGAACGAG AATTAGTGAT TAATTCACTG CCAGTAACTC TAGAAACTGA TTCTGTCCGG
GTTAGTGGTA CAGGTACGGT AGGGGTGCGC TTGTTGGGAG TAAACTGCGA TCGCATCTAT
ACCACTGAAC CTGTAGCCGA ACGAGCCGCC CATTTAAATC GGCAAATTCA GCAATTAGAA
ACGGAAAAAC GTCATCTGCA AGCCCAGGTA GATGCTTTAT CTCTACAAGC TAAGTTTATT
GAAGGTTTAC GGGAAAAAAC AGAAGAACCT TTTGCCCAAA GCCTATCGCG GAAAAATCTC
AGCCTCAGCG AAACCCTAGA CTTTCTCAAC TTTTTAGGTA GCCAATACAG CGAATATGCG
ATCGCCTCTG GGGAATGTAA AAGCCAACAA CAAGAATTAG ACAAGCAAAT ACAAGCACTC
CGCGCCTCTT TGCAGATGAT CCAAACACCC CATCCCCAAG AAAGTGTGAG TTTGATTGCA
CTCATTGAAG CTATGGGAGA AGGTGAATTT GATTTGGAAG TGTCTTACAT GGTGAATCAT
GCCAGTTGGA CTCCCTTATA TGACTTACGG TTAAATAGTA CAAATAAGAC CGTAAATTTG
AGTTACCTTG CTGAAGTCAA CCAAAATACC GGGGAAGATT GGCTAGATGT GGCGCTTACC
CTATCTACAG CCAAACCAGG ATTAGGTACA CTACCCCCCA AACTCAAACC TTGGTATATT
GACGCACCAA CTCCTCAAGT ATGGCGATCA CGGCGACAAT TAGCCGCCAG CCCTTCTTTA
CCTACCATAT CAACTACAGC TGTTCCATCT GGGGCAGGAA TTCCCGCAGA AGAGGAAGCA
GAAACAGCCG ATGATAGTTT GATTTCCGCA GAAAATATCA CGGCGGAGGT ATCCAAAGAA
GGAAGTATCG TCACATTTAA ACTTCATGGT GGTGGTAATA TTCCTAGTGA TGGCACACCT
CATAAAATCA CTGTCTTTAA TGATGATTAC CCTTGTAATT TTAATTATGT AGCAATGCCC
CGATTGGTTA GTTTTGCGTA TCTGGAAGCT AATGTGAAAA ATAGTGCTGA TGGCGTGACT
TTATTACCTG GTAAAGCCAA TATTTTCCGT GATGAAATGT ATGTTGGTAT CACTCAATTA
GAAAATGTTG CCCCAGGACA AGAATTTAAA CTTAATTTAG GCATTGACGA AGGTTTAAAA
ATTGAACGGG ATCTAGTTGA GCGTCAAGTA GATAAAAAAC TTATTGGTAA TCAACGCCGC
ACTACATATG GTTATCGTCT CATAATTACT AACTTGCTCA ATCAAGAAAC TCAGTTGCAC
TTAACTGAAC AATTGCCCGT AAGCCGCAAT GAGCAAATTA AAGTCCGCCT CAATCGCAGC
AACCCTCCCA GCCAACTAGG TGAAATGGGT ATTTTAGAGT GGAAACTAAC TATCCCACCC
CAAGTAAAGC AAGAAGTATC TTATCAGTTT GCTGTTGAGC ATCCGCCAGA GTTAACAGTT
GTGGGATTAA ATATTTAA
|
|---|
| Protein sequence | MVNPEETPSW RTTVHSQIVA VTVYSDKALV TRKGKVSLLG TERELVINSL PVTLETDSVR
VSGTGTVGVR LLGVNCDRIY TTEPVAERAA HLNRQIQQLE TEKRHLQAQV DALSLQAKFI
EGLREKTEEP FAQSLSRKNL SLSETLDFLN FLGSQYSEYA IASGECKSQQ QELDKQIQAL
RASLQMIQTP HPQESVSLIA LIEAMGEGEF DLEVSYMVNH ASWTPLYDLR LNSTNKTVNL
SYLAEVNQNT GEDWLDVALT LSTAKPGLGT LPPKLKPWYI DAPTPQVWRS RRQLAASPSL
PTISTTAVPS GAGIPAEEEA ETADDSLISA ENITAEVSKE GSIVTFKLHG GGNIPSDGTP
HKITVFNDDY PCNFNYVAMP RLVSFAYLEA NVKNSADGVT LLPGKANIFR DEMYVGITQL
ENVAPGQEFK LNLGIDEGLK IERDLVERQV DKKLIGNQRR TTYGYRLIIT NLLNQETQLH
LTEQLPVSRN EQIKVRLNRS NPPSQLGEMG ILEWKLTIPP QVKQEVSYQF AVEHPPELTV
VGLNI
|
|---|
| |