Gene Ava_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4464 
Symbol 
ID3680399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5587368 
End bp5589986 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content48% 
IMG OID637719819 
ProductDNA gyrase subunit A 
Protein accessionYP_324957 
Protein GI75910661 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.32353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CACAGGAGAG GATTATCCCG ACGGATCTGC GGAACGAAAT GTCCCGGTCT 
TATCTGGAAT ACGCCATGAG TGTGATAGTG GGTAGGGCGC TACCAGATGC CAGGGATGGT
CTAAAACCTG TGCATCGTCG CATCCTCTAC GCCATGCACG AATTGGGTTT AACCCACGAT
CGCCCGTTTA AAAAATGCGC CCGTGTGGTC GGGGAAGTGT TGGGTAAATA TCACCCCCAC
GGCGACACAG CAGTATATGA TGCCTTGGTG CGGATGGCGC AGGACTTTTC CATGCGATCG
CCCCTAGTCA ACGGACATGG TAACTTCGGT TCTGTAGATA ACGACCCCCC GGCGGCAATG
CGTTATACAG AATGTCGCCT ACAAGCCTTA ACCAGTTCCG CCCTCCTGCA AGACATCGAA
TCAGAAACAG TAGATTTTGC CGATAACTTC GACGGTTCCC AACAAGAACC CACAGTTTTG
CCATCTCGCA TTCCCCAGTT ACTACTAAAT GGTTCTTCGG GGATTGCTGT GGGTATGGCC
ACCAATATTC CGCCCCACAA CTTAGGAGAA TTAATTGATG GGGTGGTAGC AGTGATTCAC
AATCCAGAAA TCACTGACTT GCAATTAATG CAATACATCC ACGGGCCAGA CTTCCCCACA
GGAGCGCAAA TTCTGGGGAT GGGAGCGATT AAAGAAGCCT ACACCACCGG ACGCGGTTCC
ATCACCATGC GCGGTGTGGC CAATATCGAA ACCATTGAAC ATCGGGGAAG ACCAGACAGA
GAAGCAATCA TCATTACTGA GTTGCCATAT CAAACCAACA AAGCCGCACT CATTGAGAAA
ATAGCGGAGT TGGTGAACGA AAAACGGATT GAAGGCATTG CAGATATCCG AGATGAAAGC
GATCGCGACG GGATGCGAAT TGTCATCGAA CTCAAGCGCG ATGCCTATCC CCGCGTAGTC
CTCAATAACC TCTATAAGCA AACGCCTCTG CAAGCCAACT TCGGGGCCAA TATGCTGGCC
TTGGTGAATG GCGAACCCCA AATTCTCACC CTCAAACAAT TCTTAAACGT CTTCCTCGAT
TTCCGCATCG AATCTATTAC CAGACGCACC CGCTACGAAC TGCGGAAAGC GGAAGAACGG
GATCATCTTT TACAAGGGTT ATTAATTGCC CTATCTCATT TAGATGCCAT CATTAACTTG
ATTCGCAGTG CTTCCGATAC ACCCACAGCT AAAGGGGAGT TAATCACCAC CTATATGCTT
TCGGAAGTCC AAGCAGACGC AATTTTGCAG ATGCAGTTGC GCCGTTTGAC AGCCTTAGAA
GCCGACAAAA TCCGCCTAGA ACACGAAGAT TTACAAACCC AAATTGCCGA CTTACAAGAT
ATTTTGGCCC GGCGGGAACG GATACTGGAA ATCATCGAAA CCGAAATCAC CCAAATCAAA
ACCAGTTTTG CCACACCCAG ACGTACCGTA ATTACCCACG CCGAAGGTGA AATAGATGAG
CGTGACCTCA TCGCCAACGA AAAAGCAATT ATCCTCCTAA CGCAACAAGG TTACATCAAA
CGGATGCCGG TCAACACCTT TGAAGCTCAA AGCCGTGCTA CCAGAGGTAA AGCCGCCGCC
AAAGTCAAAG ACGATGATAC CATTGAGCAT TTCTTGACTT GTTGTGACCA TGACAGCGTG
CTATTTTTTA GCGATCGCGG TGTCGTCTAT TGTCTCAAAG CCTATCAAAT CCCCGTGAGT
TCCCGCACCA GTAGGGGTAC ACCCATTGTC CAATTATTAC CCATTCCCAA AGAAGAAAAA
ATCACTTCCA TTGTCCCTGT GGATGAGTTT ACCAGTGAAG AATATCTGGT CATGCTTACC
AAAGGCGGCA ACATCAAGAA AACCGAATTG GCAGCATTTA GTAATATCCG TGCCAATGGC
TTGATTGCCA TCTCCTTAGA AGAAGGCGAC CAACTGCGAT GGGTACGCCG CGCCAGAGTC
GAGGATAGTA TCATTATCGG TTCTCGTTTA GGTATGGCAA TTCACTTTAG ATGTACCCAC
GAGCAACTCC GTCCTTTAGG TAGGGCAACC CGTGGAGTAA AATCTATGAA ACTGAAGAAA
GGCGATGAAC TGGTAGGGAT GGATATTCTG CCGGCAGCAA TTCTCGATAC ATTAAACACA
GAAGAACCAG ACATCGACGA TATCGAAACA GAAGATATCG AAACCGCAGT AGAAACAACA
GAAGTCTTAG AAACCTTAGA AAACTTAGAA GCTGTAGAAG TATCTAGTAA TGCTAGTGTC
GGCCCTTGGG TGTTAGTCAT CACAATGGGA GGCTATGGCA AGCGCGTACC AGTCAGTCAA
TTCCGTCTGC AAAATCGTGC TGGACAAGGT TTGATGGCGA CTAAATTCAA AAATCGCAAA
ACCAAAGACA AATTAGCCAC CCTTGGTATC GTCAACAGCG ATAACGAAAT CATGATGGTG
ACCAATCGCG GCATCATTAT ACGCCAAGCT GTCAACGCAA TTTCCATTCA ATCGCGATCG
GCAACAGGTG TTAGAGTCCA ACGCCTGGAC GAAGATGACG CAATTACTGG AGTAGCTATA
GTTCCCCCCG ACACTGGTGA TGAGGAAGAA GCTGAATAA
 
Protein sequence
MTTSQERIIP TDLRNEMSRS YLEYAMSVIV GRALPDARDG LKPVHRRILY AMHELGLTHD 
RPFKKCARVV GEVLGKYHPH GDTAVYDALV RMAQDFSMRS PLVNGHGNFG SVDNDPPAAM
RYTECRLQAL TSSALLQDIE SETVDFADNF DGSQQEPTVL PSRIPQLLLN GSSGIAVGMA
TNIPPHNLGE LIDGVVAVIH NPEITDLQLM QYIHGPDFPT GAQILGMGAI KEAYTTGRGS
ITMRGVANIE TIEHRGRPDR EAIIITELPY QTNKAALIEK IAELVNEKRI EGIADIRDES
DRDGMRIVIE LKRDAYPRVV LNNLYKQTPL QANFGANMLA LVNGEPQILT LKQFLNVFLD
FRIESITRRT RYELRKAEER DHLLQGLLIA LSHLDAIINL IRSASDTPTA KGELITTYML
SEVQADAILQ MQLRRLTALE ADKIRLEHED LQTQIADLQD ILARRERILE IIETEITQIK
TSFATPRRTV ITHAEGEIDE RDLIANEKAI ILLTQQGYIK RMPVNTFEAQ SRATRGKAAA
KVKDDDTIEH FLTCCDHDSV LFFSDRGVVY CLKAYQIPVS SRTSRGTPIV QLLPIPKEEK
ITSIVPVDEF TSEEYLVMLT KGGNIKKTEL AAFSNIRANG LIAISLEEGD QLRWVRRARV
EDSIIIGSRL GMAIHFRCTH EQLRPLGRAT RGVKSMKLKK GDELVGMDIL PAAILDTLNT
EEPDIDDIET EDIETAVETT EVLETLENLE AVEVSSNASV GPWVLVITMG GYGKRVPVSQ
FRLQNRAGQG LMATKFKNRK TKDKLATLGI VNSDNEIMMV TNRGIIIRQA VNAISIQSRS
ATGVRVQRLD EDDAITGVAI VPPDTGDEEE AE