Gene Ava_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4460 
Symbol 
ID3680395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5584448 
End bp5584993 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID637719815 
ProductHNH endonuclease 
Protein accessionYP_324953 
Protein GI75910657 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.282325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTATCA CAATACCAGT TTTAGAGCAA TCTGTGGTGG TATTTTCGCA AAATTACTTG 
CCACTGTGTC GGGTGAATAT CAAACGGGCG ATCGTCCTGT TACTAACAAA CAAAGCTGAA
CCATTAGTTG GTTATACAGA AAATGGGTGG CGAGTTCATT CACCCAGTTT GATAATTGAT
GTACCAAAAC ATATCCGCTT AAAAATCACC TCTATTGAGA GGACATGGAA AGTTCCGCCT
GTGAATCGAC GAGAAATTTT GCGGCGAGAT CACCACAGTT GTCAATATTG CGGTAGCAGG
AAGCGTCTTA CCTTAGATCA TGTGATTCCC AGGTCTAGAG GTGGTTCTCA TACTTGGGAT
AACGTGGTTA CGGCTTGTGA AAGATGTAAC TCGCGTAAGG GAGACCGAAC ACCGGCGGAA
GTTGGTATGC AGTTGCGTAC TAAACCAAAA CCACCAGTCC ACCCGGCGGT AGCTTTTGCA
GTCAGCGATA CTTGGCGTGA TAACGCCACA CAGTTTTGGA TAGATATGCA GGCAAACCTG
GAGTAA
 
Protein sequence
MAITIPVLEQ SVVVFSQNYL PLCRVNIKRA IVLLLTNKAE PLVGYTENGW RVHSPSLIID 
VPKHIRLKIT SIERTWKVPP VNRREILRRD HHSCQYCGSR KRLTLDHVIP RSRGGSHTWD
NVVTACERCN SRKGDRTPAE VGMQLRTKPK PPVHPAVAFA VSDTWRDNAT QFWIDMQANL
E