Gene Ava_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4438 
Symbol 
ID3680431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5559492 
End bp5560265 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content41% 
IMG OID637719792 
ProductABC transporter-like 
Protein accessionYP_324931 
Protein GI75910635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.657591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGC CCATTTTAAA AGTAGAAAAT TTGACAGTAT ATCAAGGTAA TTATTTAGCG 
ATTCGAGATG TTTCTTTTAC TTTATTACCA GGAACAGATA CAGCTATAGT TGGGCCTAAC
GGCGCTGGTA AAAGCACTTT AGTAAAAGCA ATTTTAGATT TGATTCCCCG CAGCGTCGGT
CAAATTGAAA TCTTTGGTCG TCCCATAAAT AGGTTAGGAA ATTTACGCCA TCTTTTAGGC
TATATGCCAC AAAATTTTAT TTTTGACCGT AGCTTTCCCA TTTCTGTGGA AGAATTGGTA
GGACTAGGAT GGGTTGGTGA AACTCGCCAT CACAAATCTT CATTTTTCTC CAAGTTAAGG
ATTCAAAGCC GGGAAAAATC AGCAGCGATC GCCACAGCAC TTAACAGAAC TGATACTTAC
CATCTGCGAA ATCAAGCTAT CGGGACTCTT AGTGGTGGTC AACTAAAGCG GATCTTGCTG
GCTTACTGTT TGGTCATACC TCGAAAAATT TTGGTTCTCG ATGAAGCTTT TGCGGGAGTT
GATATGCAGG GTGCAGCCGA TTTTTATGCC ATGCTGAACG AATTAAAGCA GCAGGAAGGT
TGGACTGTTT TACAAGTTTC CCATGATATT GATATGGTCA GCCGCCACTG CGATCGCGTA
CTTTGTCTTA ACCAAACCGT TGTTTGTACT GGTCAGCCAG AAATAGCACT TTCACCCCAA
AACTTATTAG CAACTTACGG GCCTGGTTTT AGTCGCTACG AACATCATCA TTAG
 
Protein sequence
MNSPILKVEN LTVYQGNYLA IRDVSFTLLP GTDTAIVGPN GAGKSTLVKA ILDLIPRSVG 
QIEIFGRPIN RLGNLRHLLG YMPQNFIFDR SFPISVEELV GLGWVGETRH HKSSFFSKLR
IQSREKSAAI ATALNRTDTY HLRNQAIGTL SGGQLKRILL AYCLVIPRKI LVLDEAFAGV
DMQGAADFYA MLNELKQQEG WTVLQVSHDI DMVSRHCDRV LCLNQTVVCT GQPEIALSPQ
NLLATYGPGF SRYEHHH