Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4438 |
Symbol | |
ID | 3680431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5559492 |
End bp | 5560265 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637719792 |
Product | ABC transporter-like |
Protein accession | YP_324931 |
Protein GI | 75910635 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.657591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCGC CCATTTTAAA AGTAGAAAAT TTGACAGTAT ATCAAGGTAA TTATTTAGCG ATTCGAGATG TTTCTTTTAC TTTATTACCA GGAACAGATA CAGCTATAGT TGGGCCTAAC GGCGCTGGTA AAAGCACTTT AGTAAAAGCA ATTTTAGATT TGATTCCCCG CAGCGTCGGT CAAATTGAAA TCTTTGGTCG TCCCATAAAT AGGTTAGGAA ATTTACGCCA TCTTTTAGGC TATATGCCAC AAAATTTTAT TTTTGACCGT AGCTTTCCCA TTTCTGTGGA AGAATTGGTA GGACTAGGAT GGGTTGGTGA AACTCGCCAT CACAAATCTT CATTTTTCTC CAAGTTAAGG ATTCAAAGCC GGGAAAAATC AGCAGCGATC GCCACAGCAC TTAACAGAAC TGATACTTAC CATCTGCGAA ATCAAGCTAT CGGGACTCTT AGTGGTGGTC AACTAAAGCG GATCTTGCTG GCTTACTGTT TGGTCATACC TCGAAAAATT TTGGTTCTCG ATGAAGCTTT TGCGGGAGTT GATATGCAGG GTGCAGCCGA TTTTTATGCC ATGCTGAACG AATTAAAGCA GCAGGAAGGT TGGACTGTTT TACAAGTTTC CCATGATATT GATATGGTCA GCCGCCACTG CGATCGCGTA CTTTGTCTTA ACCAAACCGT TGTTTGTACT GGTCAGCCAG AAATAGCACT TTCACCCCAA AACTTATTAG CAACTTACGG GCCTGGTTTT AGTCGCTACG AACATCATCA TTAG
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Protein sequence | MNSPILKVEN LTVYQGNYLA IRDVSFTLLP GTDTAIVGPN GAGKSTLVKA ILDLIPRSVG QIEIFGRPIN RLGNLRHLLG YMPQNFIFDR SFPISVEELV GLGWVGETRH HKSSFFSKLR IQSREKSAAI ATALNRTDTY HLRNQAIGTL SGGQLKRILL AYCLVIPRKI LVLDEAFAGV DMQGAADFYA MLNELKQQEG WTVLQVSHDI DMVSRHCDRV LCLNQTVVCT GQPEIALSPQ NLLATYGPGF SRYEHHH
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