| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4433 |
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| Symbol | |
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| ID | 3680425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5552705 |
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| End bp | 5554747 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719786 |
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| Product | GAF sensor Signal transduction histidine kinase |
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| Protein accession | YP_324926 |
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| Protein GI | 75910630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAA TTAACCTCAA AAAGATTTTT AGCAAAAAAG AGTTACCTTT ACTTCTGCAA
AACTTAGTTG AGCAAATCAA GGTAGCGATT GATGTGGAGC TAGTAGACGG CACAAAACTG
CTGAGTATTG GGGAGCAAAC TTCACAACAC CGACATTCAA TTGAAGTGTC GGGAGAGATC
ATCGGTTGGG TTGTTGGTGA AGAACAGGCC AGCATAGTAG CTAGTTTGCT GTCATTTTTG
GCAAAACAAG AAGCAGAGAA GAAAGAGCTG GCTAAAGAAT TGTTGGAGCG ATACCAAGAA
ATTGATTTGT TTGAGGATAT ATCCACTCAA CTGACTAGAA GTTTAGATAC TCGACAGATT
GCTCAACTGG TTCTCAAAGA ATTGAGTCAA CTGATGGAAT CGTCTGCGGG GATAATTCTG
CTCCTCAGCC CAGATAAAAC TGCCTTTGAA ACTATTGCAG AATTTGGTCA GCTTTTTCAC
CAAAATCAAC CGCAACCAGG CCAGGGAATT ATTGGCAGCA TTGTACAATC TGGTCGGGCA
GAACTGATCA ATAATTTACC AGCTGATCGG CGGATATATG AGCAAAAAAA CGTCAACGCA
CTGATTTGCG TACCCTTGCG AGCGAAAGAT CGGATATTGG GAGCGATCGC CATTGGTACA
ACCAAAACCG AAGCATACAA AGCTGAACAC CTCAAGCTTG TAAGTATTTT TGCCTCACAA
ACTGCGATCG CTATTGAAAA AGCCTTGCTT TATGAACAAA GCACTCAAGC CACCGCCCAA
GCGAAAGCCC AAACAGAAAA ACTTCAGCAA GCTCTCCATG AATTGCAATT AGCACAAACG
AAGTTAATCC AAAGCGAAAA AATGTCGAGT TTGGGGCAAC TCATGGCCGG AGTTGCCCAC
GAAATCAACA ATCCAGTTAA CTTCATTTGT GGGAATTTGA GGTATGTTGC CGAATACGCC
AATGACTTAC TATACCTACT ACATGAGTAT CAAAAATTCT TACCTGTGGC TCCGTCCGAG
ATGGAATTAG ATTTAGACAA TATTGATCTG GAATTTATTC GGGACGATTT GCCCAAATTG
CTGGACTCCA TGAAAGTTGG CACAGATCGC ATTGTAGAAA TTGTCAAATC CCTGAAGAAT
TTCTCCCGCC ATGACGAAGC CGAAATGAAA ACCGTCAACA TTCAAGATGG CATTGACGGG
ACGCTAATGA TTCTCCGCCA TCGTCTGAAA GCTGGCCCTA ATTATTCAGA AATTGAAGTC
GTTAAAGACT ATGCCCAACT TCCTTTAATT GAGTGCTACC CAGGACAGTT GAATCAGGTG
TTTATGAACA TCTTGGCAAA TGCCATTGAT GCTTTAGAAG AGTTAAGAGT CAACAGTCAA
GAGTTAACAG TCAACAACCC TAAACTATGG ACTATGGACT ATGGACTTTT GACTAAACCC
CAAATCACCA TTCGCACCGA AGCCCTAGAT GATCAATGGG TGGTGATTCA CATTGCCGAC
AATGGCTCAG GAATCAAGGA AGATATCATG GGACGCATTT ATGATCCCTT CTTCACAACG
AAAGAGGTTG GTAAAGGAAC TGGGTTAGGC ATGGCCATCA GCCACCAAAT TATTGTAGAG
AGACATCATG GAATTCTCAA ATGTCGTTCT CAACCAGGTC AAGGTACAGA ATTTTGGATT
CAAATTCCAG TCAATTGTTC AGCAATGGAA GTGGCTAAAG AGCAAAATCG TCTGATTCCT
GACCTGAAAA CTGCAACCTT ACCAACCCCT ACAAGCGAAT TATCCCCAAC TGCTGATGCA
GATGGTTTCA TTCCCTCGAC AACTCCCACC TTTAAACCAA CAGAATTGCT GCTCCGTCAT
ACTCAACTGA TCCGCCAACT TTCCGAACAG AGTCCAGGCG TTGATACTGC ATCTTCTGAG
CAAATTTACC AAATTTTTCA GCGTAACCCA ATTTCGTTAA AACTTTACGC CACCTTGTTG
TCCTGGTTCT GTTGTTCTCA GCCTACACCA ATCAATCACC AAGGAAACCA CAACCATGTC
TAG
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| Protein sequence | MSAINLKKIF SKKELPLLLQ NLVEQIKVAI DVELVDGTKL LSIGEQTSQH RHSIEVSGEI
IGWVVGEEQA SIVASLLSFL AKQEAEKKEL AKELLERYQE IDLFEDISTQ LTRSLDTRQI
AQLVLKELSQ LMESSAGIIL LLSPDKTAFE TIAEFGQLFH QNQPQPGQGI IGSIVQSGRA
ELINNLPADR RIYEQKNVNA LICVPLRAKD RILGAIAIGT TKTEAYKAEH LKLVSIFASQ
TAIAIEKALL YEQSTQATAQ AKAQTEKLQQ ALHELQLAQT KLIQSEKMSS LGQLMAGVAH
EINNPVNFIC GNLRYVAEYA NDLLYLLHEY QKFLPVAPSE MELDLDNIDL EFIRDDLPKL
LDSMKVGTDR IVEIVKSLKN FSRHDEAEMK TVNIQDGIDG TLMILRHRLK AGPNYSEIEV
VKDYAQLPLI ECYPGQLNQV FMNILANAID ALEELRVNSQ ELTVNNPKLW TMDYGLLTKP
QITIRTEALD DQWVVIHIAD NGSGIKEDIM GRIYDPFFTT KEVGKGTGLG MAISHQIIVE
RHHGILKCRS QPGQGTEFWI QIPVNCSAME VAKEQNRLIP DLKTATLPTP TSELSPTADA
DGFIPSTTPT FKPTELLLRH TQLIRQLSEQ SPGVDTASSE QIYQIFQRNP ISLKLYATLL
SWFCCSQPTP INHQGNHNHV
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