| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4428 |
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| Symbol | |
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| ID | 3680459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5546990 |
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| End bp | 5548339 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719781 |
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| Product | Fmu, rRNA SAM-dependent methyltransferase |
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| Protein accession | YP_324921 |
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| Protein GI | 75910625 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase
[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATT CCCGTCAAAT AGCTTTTATC GCCCTGAGAG ACGTGCATAA AGGGGCTTAC
ACAGATGTTG CTTTAGATAG GGCGTTGCAA AAAGCAAATT TATCAGATAT TGACCGCCGT
CTAGTGACAG AATTACTGTA TGGCAGTGTT AGAAGACAAC GGACTCTTGA TTTTATTATT
GACCAACTCG CCAAAAAGAA ATCGCACCAA CAGCCAACAG AACTCCGCAG TATCTTACAT
CTAGGTTTAT ATCAACTGCG TTATCAAGAG CGTATCCCTG CTTCTGCGGC TGTGAATACC
ACTGTAGAAT TAGCGAAAGA TAATGGTTTC GCTGGACTGA CAGGTTTTGT TAATGGTTTA
TTACGGCAAT ATATCCGTTT GGCTGAAGCA TCACCAGACT TTCTCGAATT ACCAGAAAAT
CCGGTGGAAA GGTTGGGAAT TTTACATAGC TTCCCTGACT GGATTATCAA AGTATGGTTG
GAACAGTTGG GTTTGACGGA GACGGAAAAA CTCTGTGAAT GGATGAACCA AACACCAACC
CTTGATTTGA GAGTCAACCC CTTACGTACT TCCGTTGCAG AAGTGGAAAC AGCTTTAAAA
TCTGCGGGGG TTTTGGCTAG ACCTATTCCC CATTTACCCC AAGCTTTACG ACTTATTGGA
AATACTGGTT CCATCCAAAA ACTTCCAGGG TTTAGTCAAG GTTGGTGGGT TGTGCAGGAT
GCTAGCGCTC AGTTAGTTAG TCATTTGCTT GATCCCCAGC CCGGTGAAGT GATCATTGAT
GCTTGTGCTG CACCGGGAGG GAAGACGACT CACATTGCTG AGTTAATGAA AGATCAGGGA
AAAGTTTGGG CAGGCGATCG CACTGCTTCA CGTTTGCGTA AGCTGAAAGA GAATGCCCAA
CGCCTGAATT TACACTCGAT TGAAATTTGC ACAGGTGACA GTCGCAACTT ACCACAATTT
TATAATGTTG CTGACCGTGT TTTACTGGAT GCCCCATGTT CTGGCTTGGG GACTTTGCAC
CGCCATGCTG ATGCGCGCTG GCGACAAACA CCAGAATCTG TCCAGGAACT CTCGACGCTG
CAACAGGAAT TATTATCACA TACATCAAAA TTTGTCAAAG TTGGGGGTGT GCTGGTTTAT
GCCACTTGCA CGTTACATCC GGCAGAAAAT GAAGAAGTAA TTACGGAATT TATGGCTAGA
AATTCTGATT GGCAAATTGA GCCGCCTAGT CCTGATTCCC CTTATTCTGA CTACACTACA
CCACAAGGTT GGCTGAAAGT TTGGCCTCAC AATCAAGACA TGGACGGCTT TTTCATGGTG
CGCTTAAGAA AAACCAACGT TTCCGAATGA
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| Protein sequence | MTNSRQIAFI ALRDVHKGAY TDVALDRALQ KANLSDIDRR LVTELLYGSV RRQRTLDFII
DQLAKKKSHQ QPTELRSILH LGLYQLRYQE RIPASAAVNT TVELAKDNGF AGLTGFVNGL
LRQYIRLAEA SPDFLELPEN PVERLGILHS FPDWIIKVWL EQLGLTETEK LCEWMNQTPT
LDLRVNPLRT SVAEVETALK SAGVLARPIP HLPQALRLIG NTGSIQKLPG FSQGWWVVQD
ASAQLVSHLL DPQPGEVIID ACAAPGGKTT HIAELMKDQG KVWAGDRTAS RLRKLKENAQ
RLNLHSIEIC TGDSRNLPQF YNVADRVLLD APCSGLGTLH RHADARWRQT PESVQELSTL
QQELLSHTSK FVKVGGVLVY ATCTLHPAEN EEVITEFMAR NSDWQIEPPS PDSPYSDYTT
PQGWLKVWPH NQDMDGFFMV RLRKTNVSE
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