Gene Ava_4427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4427 
Symbol 
ID3680458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5545751 
End bp5546758 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID637719780 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_324920 
Protein GI75910624 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATA CAGTAAATCA ACAAATCGTA CTCAAAAGTC GCCCTGTTGG GGAACCACAA 
GAGAGTGATT TTGCTTTAGT AGAGTCACCA ATTCCCCAAC TTGGGGAAGG TGAAGTTCTC
AACCGCACTA TTTATTTATC CCTCGACCCA TATATGCGTG GTCGTCTCAG TACCAATGCT
TCCTACGCAG CCTCAACGGA ATTAAACTCA GTTATTGTTG GTGAAACAGT CAGCCAAGTC
ATTCAATCCC ATCATCCAGA CTTTCAACCA GGAGATTTTG TTCTCAGCAA TCATGGTTGG
CAAACTTACG CTGTTGCTAA AGGTAAGACT TTGCGTAAAC TTGACCCCAA TCAGGCTCCT
CTATCCTACT ATTTAGGCGT ATTGGGTATG CCTGGTCTCA CTGCTTACGC CGCTTTACTG
GATATAGGTC AACCAAAAGC AGGTGAAACT GTAGTTATTT CGGCCGCTTC TGGTGCTGTC
GGTGCGGTAG CAGGTCAAAT TGCCAAAATT AAAGGCGCTA GAGTGGTAGG GATCGTTGGT
AGTGACCAAA AGCGCGACTA TATTGTCAAA GAATTAGGCT TTAATGTGGG AATTAACCGC
CGGACGCAGG AAATCGCTTC AGCACTCAAA GAAGCTGCAC CTGATGGTAT TGATGTTTAT
TTTGACAATA CAGCAGGTGA AATTTTAGAA GCGGTGTTGC AGCAAATTAA CTTGGGAGCC
AGAATTCCTT TGGTAGGATT AATTTCCCAA TATAATGCTT CATCACCACC TCCTGGCCCG
AATCTACTGC CTTTGCTCAT TAAAAGAGCT TTAATTAAAG GTTTTTTGGT GAGTGATTAT
CAACACCGTT TTTCTGATTT TGCCCGTGAT GTTACTGAAT GGTTGCAGTC AGGACAACTG
AAATATAAAG AAGATATAGT CGTTGGTTTG GAAAATGCTC CTCGTGCCTT TATTGGCTTG
TTGCGAGGGG AGAATTTTGG CAAATTAATT GTCGAGGTAA GTCAATAG
 
Protein sequence
MADTVNQQIV LKSRPVGEPQ ESDFALVESP IPQLGEGEVL NRTIYLSLDP YMRGRLSTNA 
SYAASTELNS VIVGETVSQV IQSHHPDFQP GDFVLSNHGW QTYAVAKGKT LRKLDPNQAP
LSYYLGVLGM PGLTAYAALL DIGQPKAGET VVISAASGAV GAVAGQIAKI KGARVVGIVG
SDQKRDYIVK ELGFNVGINR RTQEIASALK EAAPDGIDVY FDNTAGEILE AVLQQINLGA
RIPLVGLISQ YNASSPPPGP NLLPLLIKRA LIKGFLVSDY QHRFSDFARD VTEWLQSGQL
KYKEDIVVGL ENAPRAFIGL LRGENFGKLI VEVSQ