Gene Ava_4422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4422 
Symbol 
ID3680453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5537617 
End bp5538333 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID637719775 
ProductPirin-like 
Protein accessionYP_324915 
Protein GI75910619 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA ATACAATCAA CAATCTCATT CATGATAGAA ATGCACGGGG TCGTAGTCAA 
ACAGGTTGGC TTGATAGTTA TCACACCTTT TCTTTCAGCA GTTTTTATGA TCCCAACCGT
ATGGGATTCC GTTCCTTACG AGTCATCAAT GACGACCGCA TTGCACCTGG TGCAGGATTT
CCCACTCATG GACATCGTGA TATGGAAATT CTCACTTATG TACTCTCAGG TGCAGTAGAG
CATAAAGACA GTTTGGGTAC TGGTTCAGTT ATTCGTCCTG GCGATGTGCA GATTATGAGT
GCTGGTACGG GAATTCAACA TAGTGAATTT AACCACTCAC GCACCGAAGC ATTACATTTA
CTGCAAATCT GGATTTTACC TGACGAACAA GGATTAGCAC CCAGATACCA ACAGAAAGCT
TTCACCCCAG AAGAAAAACG CGGTCAACTG CGTCTTGTAG CTGCTAAAGA CGGACGTGAT
GGTGCTGTCA CTATTCACCA AAATGTTGAT ATCTACGCCT CTATTTTAAA ACCAGGTGAT
GTAGTCAATT ATCACGTAAA AGGCGATCGC TATGCTTGGT TGCAAATCGC TCAAGGTGTC
GCCACTTTAA ATGGTGAAGA ACTCAGAGCA GGTGATGGCG TACAAATCAA CACAGAAGAG
CAACTGAAAA TCAGTACAAG CGTCGGTACA GAGTTATTGC TGTTCGATTT AGCCTGA
 
Protein sequence
MSQNTINNLI HDRNARGRSQ TGWLDSYHTF SFSSFYDPNR MGFRSLRVIN DDRIAPGAGF 
PTHGHRDMEI LTYVLSGAVE HKDSLGTGSV IRPGDVQIMS AGTGIQHSEF NHSRTEALHL
LQIWILPDEQ GLAPRYQQKA FTPEEKRGQL RLVAAKDGRD GAVTIHQNVD IYASILKPGD
VVNYHVKGDR YAWLQIAQGV ATLNGEELRA GDGVQINTEE QLKISTSVGT ELLLFDLA