Gene Ava_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4412 
Symbol 
ID3680442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5531211 
End bp5531696 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID637719765 
Productribonuclease III 
Protein accessionYP_324905 
Protein GI75910609 
COG category[S] Function unknown 
COG ID[COG1939] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCCC AGGAGGAAGA GTTACTAGAT AAACAAGGTG AAGACCTTAA GCCAGATTCA 
TCTTGGAATC AAGCACTCTT GGCAACCACT GCGCCATTAA TTCAAAATAT CTCCCAGACA
CAATTGCAGC AGATTTCTCC TGCGGCTTTG GCTTATGTAG GGGATGCAAT TTATGAACTT
TATGTTAGAA TGTTTTACCT GCTACCACTA CAGCGATCTG ATGCTTACCA TCGTTTAGTA
GTAGCACAAG TAAGAGCAGA AACACAGGCG CTACATTTGC GATCGCTGAC TCCTTACCTG
AGGGCAAGTG AATTAGAAAT TGTCCGCCGA GGCCGTAATG CTGCCGCAGG TCGTCCCAAA
CGAGTTGATC CCGAAATATA TCAACAAGCC ACAAGTCTTG AAGCTTTAAT AGGCTACCTT
TATATCACCG ATTTCCCACG TTTAACCGAA CTGTTACAGA AAATCCATCT AGAGAAAGAA
GAATAA
 
Protein sequence
MKSQEEELLD KQGEDLKPDS SWNQALLATT APLIQNISQT QLQQISPAAL AYVGDAIYEL 
YVRMFYLLPL QRSDAYHRLV VAQVRAETQA LHLRSLTPYL RASELEIVRR GRNAAAGRPK
RVDPEIYQQA TSLEALIGYL YITDFPRLTE LLQKIHLEKE E