Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4409 |
Symbol | |
ID | 3680536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5527464 |
End bp | 5528552 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719762 |
Product | hypothetical protein |
Protein accession | YP_324902 |
Protein GI | 75910606 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.302164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGC TGGAACAGGT AAGATTAAAA TTAATTATGC TTCAGCCCTT TTTATCTCGC GCAGTCCTGA TTTGTTTGTC TAGTATGATC GCCTTTTTAA GTGTTGCTTG TAGCGGAGGC AAACAAAAAA CGGCTATTCT TCGTAATCAA CAGTCTGTGG TGACGGAGGA TTTACCAGTA CCAGTTGCTG ACGAACCACA AGTAGCACCA AATATTTCGC AGTCAACAGA GTTGCCATCA TCGCCAATGG AACCGAGTTC TTTTGAGATG GGGTTAGATA AGGCGGCTGG TGCTGAGAGT ATTAGTCAAT CGGCGCAATC CCCTGATGAT TGGTATTTGG TAGCCAGTCA GTTCCATGAT GCGATCGCTC TGATGAAAAA AGTTGAAAAG CAAAGTCCTG AGTTTGCGAT CGCTCAAACT AAAATTTCTG AGTATCAACG TCAGATGAAG TACGCTGTAC GCCAAGCTAA TACTGTCGCC CGACCATTGC CTACAAGACC GACTCCCAGG ATAGTGGCAA CTGCGCCCCA ACAGTCTAGC TCACCCCAGT TTGTTATCCC TGTCCCACCA CCTGGAAGCG CAAAACTGTC AACAGAACAA GTAGATTTTC CGATATCCAC AGCACTAACA TCGGAACAAG ATGTTTTTGT CGCCCCAATT AAACGGCGAA TTGGGGGTAC ACCAATTGTG ACGGTGACTT TTAACGGTCA GCAACAATTT GACATGATTG TGGATACTGG AGCCAGTGGT ACTGTGATCA CTCAACAGAT GGCAAATGCT TTGAGAGTTG TTACTGTGGG TAAGGCCAAG GCTAACACCG CTAGTTCTAA GGGTGTAGAG TTTCCCATTG GTTATGTAGA TTCGATGGCA GTGGGAGGGG TGATAGTAAA TAGGGTACCA GTAGCGATCG CTGGGGCAGA ACTCGAAACT GGGCTTTTAG GACATGACTT TTTTGGCAAT TACGATGTCA CTATTAAGCG CAATGTCGTA GAATTTCGCC GCCAATCGCA CTCAGAAGCT AACTCTTCAG AAAGTGTACC AATTGTTCCA ATTTTGCCCA AGCAGTACCA GTCTGTAGGA TCTCCTTAG
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Protein sequence | MPSLEQVRLK LIMLQPFLSR AVLICLSSMI AFLSVACSGG KQKTAILRNQ QSVVTEDLPV PVADEPQVAP NISQSTELPS SPMEPSSFEM GLDKAAGAES ISQSAQSPDD WYLVASQFHD AIALMKKVEK QSPEFAIAQT KISEYQRQMK YAVRQANTVA RPLPTRPTPR IVATAPQQSS SPQFVIPVPP PGSAKLSTEQ VDFPISTALT SEQDVFVAPI KRRIGGTPIV TVTFNGQQQF DMIVDTGASG TVITQQMANA LRVVTVGKAK ANTASSKGVE FPIGYVDSMA VGGVIVNRVP VAIAGAELET GLLGHDFFGN YDVTIKRNVV EFRRQSHSEA NSSESVPIVP ILPKQYQSVG SP
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