Gene Ava_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4407 
Symbol 
ID3680534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5525504 
End bp5526355 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content35% 
IMG OID637719760 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_324900 
Protein GI75910604 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.167881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAA GCCCACTCCG ATATCCAGGC GGTAAATCAA AAGCTATCAA GCAGATAATT 
GAATACCTAC CGACAAGCTT TCATGAATAT CGGGAACCAT TTGTAGGCGG TGGTTCTGTA
TTTATTTACT TAAAGCAAAA GTTTCCTACG TTAAAAATTT GGATTAATGA TTTAAATACT
GAATTATTTC TATTCTGGAG ATTTGCCCAA TCTAATTTAC CTGAGCTAGT GCAAGAAATA
CGCCGATTTA AAGATAGATA TCAAGATGGT AAATCACTGT TTTTGGAATT AACCACAGTC
GATGTTACTA GTCTGTCTGA CTTCGACAGA GCAGTAAGAT TTTTTATCCT CAACAGAATT
ACCTTCTCTG GTACTGTAGA ATCAGGTGGT TTCTCTCAAC AAGCTTTTCA AAAAAGGTTT
ACTTACTCTT CAATAGAACG ATTAGAGAAA TTAGCAGATA TTCTAACTGA AGATATCAAG
ATTACTAACT TAGACTACAG TCAACTACTG AATAGTGAAC AAAACGACGT ATTTATATTC
TTAGATCCGC CATATTTTAG TGCTACAAAA TCTAGATTGT ATGGTAAAAT TGGGGATTTA
CATACATCTT TTGAACATCA GCGATTTGCT GAGTTATTGC AACAATGTCC CCATCGTTGG
CTTATTACCT ACGACAATTC ACCGGAAATC CGAGCTAATT TTTTATCTGC TCACATATAC
GAATGGGAAT TGCAATATGG CATGAATAAC TATAAACAAA GCGGTGCTGC CAAGGGACAA
GAGTTATTTA TTAGCAACTA TGAAATCAAA CATAATTCCC ATAAAATGGC AAAAAATCAA
CAGAATTTAT AG
 
Protein sequence
MLKSPLRYPG GKSKAIKQII EYLPTSFHEY REPFVGGGSV FIYLKQKFPT LKIWINDLNT 
ELFLFWRFAQ SNLPELVQEI RRFKDRYQDG KSLFLELTTV DVTSLSDFDR AVRFFILNRI
TFSGTVESGG FSQQAFQKRF TYSSIERLEK LADILTEDIK ITNLDYSQLL NSEQNDVFIF
LDPPYFSATK SRLYGKIGDL HTSFEHQRFA ELLQQCPHRW LITYDNSPEI RANFLSAHIY
EWELQYGMNN YKQSGAAKGQ ELFISNYEIK HNSHKMAKNQ QNL