| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4398 |
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| Symbol | |
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| ID | 3680525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5510609 |
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| End bp | 5512174 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719751 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_324891 |
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| Protein GI | 75910595 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0324397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000237208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTAG AGGAATTGCT GGCACAATAT GCGACTGGAG TCATCAATTT TAGTGGTGTT
GACCTCTCGG AAGCTAATTT GAGTGGTGTC AAACTCTGTG GTGTGAATTT TAGCCAAGCA
AATTTGAGTA TAGCTAACCT GAGTGGATCA AATTTGAGCG AAGCTGACTT CAGCCATGCC
AAACTGAACG TAGCTAGACT GAGTGGTGCC AATCTCACTA ATGCTATTTT CAATCATTCC
AGCCTCAATG TTGCTAATTT AATTCGTTCT GACCTCAGTC GCGCTCAATT ACGTGGGGCT
TCCTTGGTAC GTGCTGAGTT AATTCGTGCG GAACTCAGTC GGGTTGATTT GTCGGAAGCA
AACCTCAACA GTGCTGATTT GCGAGAAGCT ACACTCCGCC ACGCCAATCT TCGCCACGCC
AATTTGAACG GAGCCAGCTT GAAAGGTGCA TCCTTGGTAG GAGCTAATTT GGAAATGGCT
AACCTTAATG GCTCTGACTT GAGTCGTTGT GATTTAACCA GCGCCAACCT GCGAGATGCT
GAACTAAAAC AGGTAAACTT CCGCCATGCT AACCTTAGTG GTGCAGATTT GAGCGGAGCG
AACCTCCGGT GGGCTGATTT GAGTGGTGTA AACCTGAGTT GGGCTGATTT AAGTAATGCA
AAATTGAGTG GTGCTAATTT AGTCGGCGCA GACTTGAGCA ATGCCAATTT AACAAATGCT
AGTTTAGTCC ATGCCAATTT AATTCAAGCA AAATTAATTA GAGCAGAATG GGTGGGTGCT
GATTTAACCA GCGCCATTTT GACTGGTGCA AAACTTTACT CTACTTCCAG ATTTGGCTTA
AAAACAGAGG GTTTGATTTG TCAATGGATT GACTTAAGTC CTACAGGCGA TCGCTCCATT
ATCCAACGGT TTGACACTGA AGATCCACGA GAATTTTTCA ACGAAACCCC ACCAACCATT
CAAATTGTTA TCGATGCAGC TTTAGAAGCA GAAGCGAACT TTGCCTTAGC TGGCGCTTAC
TACCACATCG CCCAAGAATA CTCCATCCTC AAACAACCCC CCAGCATGGA AATCAGTCGT
CGTCGGACTG TGTTTACATT CCGGGTAGAT AATGACGCGG ACTTATTACC TACAGCCTGT
ATGGCAATTT TACCTTTTAA AGATGCTGTT AATACCCAAA AGAATATTTA TGCCCTGTTA
GCCATGATGG AACAGGAAAA TATATCTTCC TTAGGAATAA AAACACCCCA TCGGGTGAAG
GAATTAACAA GTGCGATCGC GGAAGCTATA AGTCAGGCAC AGACCATGAA AAAAACCAAA
AAGAACCTGC ACTTAGCTGC AAAAATCGAA TTTTTTCAAG CTCCAACCCA AACCATATTA
ACTAATTCCA GCGCTCAAAC TTTGATTGTT CATGACAGCC CCAACTTTGG TAAGCGATTT
ATCAACTCCT CAATTACCGA AATGACTTTT TCATCCGATG TATCCGGTGA ATCTCTGCCA
CATAACTTAC CTGGGTTAAA CACACTTACA GATTTTGTTA ACAGTTTTCA CTATGTGAAT
GAATAA
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| Protein sequence | MNVEELLAQY ATGVINFSGV DLSEANLSGV KLCGVNFSQA NLSIANLSGS NLSEADFSHA
KLNVARLSGA NLTNAIFNHS SLNVANLIRS DLSRAQLRGA SLVRAELIRA ELSRVDLSEA
NLNSADLREA TLRHANLRHA NLNGASLKGA SLVGANLEMA NLNGSDLSRC DLTSANLRDA
ELKQVNFRHA NLSGADLSGA NLRWADLSGV NLSWADLSNA KLSGANLVGA DLSNANLTNA
SLVHANLIQA KLIRAEWVGA DLTSAILTGA KLYSTSRFGL KTEGLICQWI DLSPTGDRSI
IQRFDTEDPR EFFNETPPTI QIVIDAALEA EANFALAGAY YHIAQEYSIL KQPPSMEISR
RRTVFTFRVD NDADLLPTAC MAILPFKDAV NTQKNIYALL AMMEQENISS LGIKTPHRVK
ELTSAIAEAI SQAQTMKKTK KNLHLAAKIE FFQAPTQTIL TNSSAQTLIV HDSPNFGKRF
INSSITEMTF SSDVSGESLP HNLPGLNTLT DFVNSFHYVN E
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