Gene Ava_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4381 
Symbol 
ID3680567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5487319 
End bp5488101 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content37% 
IMG OID637719734 
Producthypothetical protein 
Protein accessionYP_324874 
Protein GI75910578 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.267126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.22562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT TTTTAAAATT GTCTATTGAG GACATTATTA CTCATCTTAA AGTCTCTTTT 
CAAATGCCTA GTATACTAGA AGCGATCGCT ACCCAGAGAA TTATTGCTGA GACTGCGGAA
CAACTAGGCA TTCAATTAAG TGTAGAAGAA CTACAACAAT CTGCCGATAG TATGCGTTTT
GCTAACCGCT TGCTAAAAGC GGATGATACT TGGAATTGGC TACAAAAACA CTATCTAACC
ATAGATGATT TTGAAGAAGT AGCCAAATCA AACTTATTAC ATATGAAATT GGCTGAACAT
TTATTCGCTG ACAAAGTTGA ACCTTTTTTT TATGCTCATA AAATCGATTA TACTGGAGCT
GCAACCTATG AAGTAATTCT AGATGATGAA GACTTAGCCT TAGAGTTATT TTATGCTTTG
CAAGAAGGTG AAATTAGTTT TCAGGAAATA GCCCGCCAAT ATATTCAAAA TCCTGAAATC
CGCCGTGCTG GAGGTTATCA AGGGATTCGC TATCGTTCGG AGTTTCGCCC AGAAATAGCT
GCGGCCGTCT TTGCCGCTAC GCCTCCCCAG GTTCTCAAAC CAATAATTAC ACCCAAAGGT
GTACATATAA TTGCAGTGGA GGAAATCATT ACACCAGAAT TAGATGAATC ACGCCGGATT
CAAATACTAA AAGATTTCTT CACTCATTGG TTACAACAAC AAATTACTAA TTTGGAAATT
GTCGCTGAAC TTTCTCAAAA TTCTCAATCT TCATCTTCCT CAGAATTACC AAAGCCAGCT
TAG
 
Protein sequence
MENFLKLSIE DIITHLKVSF QMPSILEAIA TQRIIAETAE QLGIQLSVEE LQQSADSMRF 
ANRLLKADDT WNWLQKHYLT IDDFEEVAKS NLLHMKLAEH LFADKVEPFF YAHKIDYTGA
ATYEVILDDE DLALELFYAL QEGEISFQEI ARQYIQNPEI RRAGGYQGIR YRSEFRPEIA
AAVFAATPPQ VLKPIITPKG VHIIAVEEII TPELDESRRI QILKDFFTHW LQQQITNLEI
VAELSQNSQS SSSSELPKPA