Gene Ava_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4371 
Symbol 
ID3680557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5478863 
End bp5480401 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content45% 
IMG OID637719724 
Productpeptidase M16-like 
Protein accessionYP_324864 
Protein GI75910568 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.325226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGAG CAGCAACAGA TATGCACAGG CGTAAACAAT TCAAAATTAG AAATCCAAAA 
TTCACAATGG GAAAAGGCAA AAGTTTTATT TTGGCGTTGG TGGCTATTTT TGCCTTTTTA
GCTGTGACTT TTAACTTTTC CCTGACGGCG ACAGCAGCAG CCAAACACTA TACAGAGTTG
CAGTTTGCGC CGTTACCGGA GGTGAAGTTA CCCAAGTATG AACGGTTTGT ATTGCAGAAT
GGCTTGGTTG TCTATCTCAT GGAGGATAGG GAACTACCTT TAATTGGTGG TACAGCCCTA
GTCAGGACTG GGAGTCGTTG GGAACCAGCA GATAAAGTGG GATTGGCTAG CTTTACTGGT
GGCGTGATGC GGACTGGTGG AACTAAGGAG CATTCACCTG ATGATTTGAA TGAAATATTA
GAACAACGCG CCGCATCGGT AGAAGTGAAT ATTGGTGAGG CTGCGGGTAG CGCTAGTTTT
GAGGCGCTGA GTGAAGATGT AGAAACAGTG TTTGGGCTAT TTGCTGAGGT GTTGCGATCG
CCAGTGTTTG CTCAAGCTAA ACTAGATTTG GCGAAAACTC AAGCAAAAGG CGGTATTTCT
CGCCGCAATG ATGATCCTGA TGATATTGCT AATCGGGAAT TTCGCAAGCT GATTTATGGC
AAAGATAGCC CCTATGGTCG GATTACAGAA TATGCTACTG TGAATGCGAT CGCCCGTGAA
GATTTGGTAC AGTTCCACCA ACAATATTTC CACCCCAATA ATATGATTTT GGGCATTGTG
GGAGATTTTG ATAGTAAAAA AATGCGATCG CTCATTCAAG CCAAGTTGGG TAACTGGGCG
CGTAACCCAA AATTTACTAA ACCAACTTTA CCAGCAGTTT CCCCAGCAAA TACCGGTGGG
GTATTTTTCG TCAATCAACC CCAACTTACC CAAAGTAGTA TTTTAGTTGG GCATTTGGGG
GGTAAGTTCG ATAACCCCGA CTATGCAGCC TTGGACGTAT TGAATGGGGT GTTAAATGGT
TTTGGGGGTC GTTTATTTAA TGAGGTGCGA TCGCGTCAAG GTTTAGCCTA TTCTGTATAT
GGTTACTGGA GTCCCCGCTT TGACTATCCT GGGATGTTCA TGGCTGGTGG ACAAACCCGT
TCTGATGCGA CTGTGCAGTT TGTCAAAGCT TTACAAGCGG AAATTAAACG CATCCAATCC
CAACCCGTAA CAGCAGAAGA ATTAGCCCGT GCTAAAGAGT CTACCCTCAA TTCTTTTGTA
TTCAACTTCC AAGACCCCAG CCAAACCTTA TCCCGATTGA TGCGCTATGA ATACTATGGC
TATCCGGCTG ATTTTCTCTT CCGCTATCAA AAAGCCGTAG CCGCCACCAC AATAGCTGAT
GTGCAAAGGG TAGCCAAGCA ATACCTCAAA CCAGATAATC TTGTCACTCT GGTGGTGGGT
AATCAAACCG CTATTCAACC ACCATTAACT CAGCTAGCCG CTCAAGTCAC ACCAATCGAT
GTGACAATTC CTAGTCCACC ACAACAAGCG CAGAATTAA
 
Protein sequence
MRRAATDMHR RKQFKIRNPK FTMGKGKSFI LALVAIFAFL AVTFNFSLTA TAAAKHYTEL 
QFAPLPEVKL PKYERFVLQN GLVVYLMEDR ELPLIGGTAL VRTGSRWEPA DKVGLASFTG
GVMRTGGTKE HSPDDLNEIL EQRAASVEVN IGEAAGSASF EALSEDVETV FGLFAEVLRS
PVFAQAKLDL AKTQAKGGIS RRNDDPDDIA NREFRKLIYG KDSPYGRITE YATVNAIARE
DLVQFHQQYF HPNNMILGIV GDFDSKKMRS LIQAKLGNWA RNPKFTKPTL PAVSPANTGG
VFFVNQPQLT QSSILVGHLG GKFDNPDYAA LDVLNGVLNG FGGRLFNEVR SRQGLAYSVY
GYWSPRFDYP GMFMAGGQTR SDATVQFVKA LQAEIKRIQS QPVTAEELAR AKESTLNSFV
FNFQDPSQTL SRLMRYEYYG YPADFLFRYQ KAVAATTIAD VQRVAKQYLK PDNLVTLVVG
NQTAIQPPLT QLAAQVTPID VTIPSPPQQA QN