| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4362 |
|---|
| Symbol | |
|---|
| ID | 3680606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5469452 |
|---|
| End bp | 5470612 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637719715 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_324855 |
|---|
| Protein GI | 75910559 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.084908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACAG GTTTTTTGGA TGCTGTATTT AATGGTATTA GCATCGGTTC TGTGCTATTA
ATTGCCGCCT TGGGATTAGC CATTATTTTT GGCTTGATGG GGGTGATTAA TATGGCGCAT
GGCGAATTGA TGATGTTTGG GGCTTATACA ACATTTGTTG TACAGAATGG CTGTAAACAA
TTGGGCGGTT TTTGGTTTGA GATTTATATA TTTCTGGCGT TAATTATTGC TTTCTTTTTC
ACTGCATTTA TTGGATTAAT TCTGGAAAGA GGTGTGATTC GTCACCTCTA TGGAAGACCT
CTAGAAACGT TGTTAGCAAC TTGGGGCGTA AGTTTAATTT TCCAACAGTT TGTCCGTAGT
GTGAATTGGG TTTTAGTAAT TGGCTTGGGC TTGTTTTCTC TGTTGTTTTT TGGGGGGTTA
TGGGTTTTAA ATTCCCGGAC AAATTTAGAG AGAATTCGTA ATTGGGTTGT GGCGGTGATT
TTCTTGCTAT CTTTGGGGGT GACAATCACC ACAGGTAACT TATTAAGTCA AACTTATCAG
CTAGCAGTAA CCCAACCTTG GTTTGGGGCG CAAAATGTTG ATGTGACTGC GCCTAGATGG
TTACAAACCG GCGTATCTTT AGGTGGGGTA CAATTACCAT TCGCCAGGTT ATTTATTATT
GCTTTGACAA TAATTTGTGT GGGGGGAATT TATCTATTTT TACAGCGTTC TAGCTGGGGA
TTAAGAATTC GGGCTGTGAC ACAAAACCGG AGTATGAGTG CTTGTTTGGG TATCCCCACC
GAAAAAGTTG ATGCGATTAC CTTTGCTTTG GGTTCTGGTT TGGCGGGTGT GGCTGGGTGT
GCGATTAGTT TGCTTGGTTC TGTGGGGCCA AATACCGGAC AAAATTATAT TATCGATACT
TTCATGGTGG TGGTTGTTGG GGGTGTGGGT AACTTAGCGG GTACTATTGT CGCTGCTTTG
GGAATTGGGA CAGCTAACTT TTTAATTGGT TCTGGGACTA TAGCTTTGTT GTCAACTCCT
GTGAAACCTC TAGCAGATTT CTTGACGTTT TTTGCCACCA CAAGTATGGC TAAAGTAATG
GTATTTGTGT TGATTATTTT ATTTCTACAG TGGAAGCCGG CGGGGATTTT TCCGCAGAAG
GGACGTAGTG TTGATGTTTA A
|
|---|
| Protein sequence | MLTGFLDAVF NGISIGSVLL IAALGLAIIF GLMGVINMAH GELMMFGAYT TFVVQNGCKQ
LGGFWFEIYI FLALIIAFFF TAFIGLILER GVIRHLYGRP LETLLATWGV SLIFQQFVRS
VNWVLVIGLG LFSLLFFGGL WVLNSRTNLE RIRNWVVAVI FLLSLGVTIT TGNLLSQTYQ
LAVTQPWFGA QNVDVTAPRW LQTGVSLGGV QLPFARLFII ALTIICVGGI YLFLQRSSWG
LRIRAVTQNR SMSACLGIPT EKVDAITFAL GSGLAGVAGC AISLLGSVGP NTGQNYIIDT
FMVVVVGGVG NLAGTIVAAL GIGTANFLIG SGTIALLSTP VKPLADFLTF FATTSMAKVM
VFVLIILFLQ WKPAGIFPQK GRSVDV
|
|---|
| |