| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4361 |
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| Symbol | |
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| ID | 3680605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5468018 |
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| End bp | 5469334 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719714 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_324854 |
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| Protein GI | 75910558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000367621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAC GAATTAACCG ACGCAGATTT TTAATTTACG GCTCTGCAAC TATTGGTAGC
AGCATCTTAC TGAAGGCTTG CGCTAATAAC ACCCCAAATG CTACAAACAG TCCAAGCACC
TCTGGGAATG CTTCTCCTGT GGCTGCTAGT GGTGGTAACA CGATCAAAAT AGGTATTCTG
CACTCTCTCA GTGGCACAAT GTCTATCAGT GAAAAAAGCG TTGTAGATGC TGAGAAATTA
GCTATCAAAG AAATTAACGC GGCTGGCGGT GTTTTAGGTA AACAAATTGA AGCCATTGTT
GAGGATGGTG CTTCTAACTG GGATACTTTT AGAGAAAAAG CTACCAAGTT GATTGATCAA
GATAAAGTAG CTGTAGTTTT TGGTTGTTGG ACTTCAGCTA GCCGCAAAAA TGTGAAGCCA
GTATTTGAAA GTAAAGACCA TATGCTGTGG TATCCCGTGC AGTATGAAGG TCAAGAGTGT
TCTAAAAACA TTTTTTACAC AGGTGCAGCA CCAAATCAAC AAATTGAACC TTCTGTTGAT
TGGTTGTTAA AAAATAAGGG CAAGGAATTC TTTTTAGTCG GCTCAGACTA TGTTTTCCCT
CGGACGGCTA ACACTATTAT CAAAGCCCAA TTAGAAGCTT TAGGTGGAAA AACAGTTGGT
GAAGATTATT TACCATTAGG TAATACAGAA GTTACACCAA TTATCACCAA AATTAAACAA
ACATTACCCA ATGGTGGGGT AATTTATAAC ACTTTAAATG GTGATAGTAA CGTAGCTTTC
TTCAAACAGT TAAAAGGTGC TGGATTAACA CCGGATAAAT ACCCTTCTAT GTCTGTAAGT
ATTGCCGAAG AAGAAGTTAA AGCAATCGGT GTTGAGTATT TAAAAGGTCA CTATGCTGCT
TGGAATTATT TCCAAACAGT AGATACTCCT GCTAATAAGA AATTTGTTGA AGCTTTTAAG
AAAGAATATG GTGCAGACCG GGTAACAAAT GACCCGATGG AAGCTGCATA TATCGCTGTG
TATTTGTGGA AGCAAGCAGT AGAAAAAGCG GGTAGTCCTG ATTTAGCTAA AGTGCGGGCG
GCGGCTTATG GTCAAACCAT AGATGCACCT GAAGGAAAGG TGACAGTTAA TGCTAATCAT
CACATATCTA AAGTTGTGCG GATTGGTGAA GTTAGAGATG ATGGTTTGTT TGATATTGTT
TATGCTACGC CTGCGCCAGT TGAGCCAGTC CCTTGGAATC AATTTGTGAA GGAAACGAAA
GGATTTGCTT GCGATTGGTC AGATCCAGCT AAGGGTGGTA AGTACAAAAA AGCTTAA
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| Protein sequence | MSRRINRRRF LIYGSATIGS SILLKACANN TPNATNSPST SGNASPVAAS GGNTIKIGIL
HSLSGTMSIS EKSVVDAEKL AIKEINAAGG VLGKQIEAIV EDGASNWDTF REKATKLIDQ
DKVAVVFGCW TSASRKNVKP VFESKDHMLW YPVQYEGQEC SKNIFYTGAA PNQQIEPSVD
WLLKNKGKEF FLVGSDYVFP RTANTIIKAQ LEALGGKTVG EDYLPLGNTE VTPIITKIKQ
TLPNGGVIYN TLNGDSNVAF FKQLKGAGLT PDKYPSMSVS IAEEEVKAIG VEYLKGHYAA
WNYFQTVDTP ANKKFVEAFK KEYGADRVTN DPMEAAYIAV YLWKQAVEKA GSPDLAKVRA
AAYGQTIDAP EGKVTVNANH HISKVVRIGE VRDDGLFDIV YATPAPVEPV PWNQFVKETK
GFACDWSDPA KGGKYKKA
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