Gene Ava_4350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4350 
Symbol 
ID3680692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5457918 
End bp5458640 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID637719703 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_324843 
Protein GI75910547 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0344715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGTA AGCAGGTTTG GCGACTGATT CCTTTATTAG CAGCTTCCGG TAGTGTACAA 
ATGGCAATTG ACCGTTGGCT ACTAACACAA CACCAATCTG GTAAGCATCC TTCTACCATA
AGATTTTACA CTTGGTCGCC ACCCGCTATT TCCCTTGGGT ATCATCAACG CCAATATCCA
GAACATTGGC AAAACCTGAT TTGGCAAAAT CAAAAATTAG ACTTGGTGCG TCGTCCTACA
GGTGGTAGGG CAGTACTCCA CCAAGGTGAC TTAACTTATG CTGTAGTAAC ATCAGGACTA
GGTGATAATC GCCTGGTGGC ATACCAGAAG ATTTGTGAGT TTTTAATCCA AGGATGGCGA
TCGCTCGGTT TTGAATTAAG CTATGGTACA GCCGGACGTG GTTACATCCA CAATCCCAAC
TGTTTTGGTA CAGCTACAGG TGCAGATTTA GTCTTACCAA CCGGAAGCAA ACTCATAGGT
AGCGCTCAGT TGCGACGCGG CGACGTAATT CTACAACATG GTTCTATCCG TCTCCAGCCA
GATACAAAAC TATTTGCACA AGTATTCGGT GTAGAAGATT TTAACCCCAT AAAATTCAAC
CTGAGTGTAG ATGATATTAT CTCGGCTTTA ATTACAGCAG CTAACAACTG TTTTAATATA
CAACTGGAGA CACAACCCCT ATCCCCCTCA GAATGGGATG AAATTCGAGA GAACTTTGAC
TAG
 
Protein sequence
MASKQVWRLI PLLAASGSVQ MAIDRWLLTQ HQSGKHPSTI RFYTWSPPAI SLGYHQRQYP 
EHWQNLIWQN QKLDLVRRPT GGRAVLHQGD LTYAVVTSGL GDNRLVAYQK ICEFLIQGWR
SLGFELSYGT AGRGYIHNPN CFGTATGADL VLPTGSKLIG SAQLRRGDVI LQHGSIRLQP
DTKLFAQVFG VEDFNPIKFN LSVDDIISAL ITAANNCFNI QLETQPLSPS EWDEIRENFD