| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4343 |
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| Symbol | |
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| ID | 3680685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5447630 |
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| End bp | 5449909 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719696 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_324836 |
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| Protein GI | 75910540 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.77937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG AAATTATAAA AGTCTTATTG GTAGAAGATA ATCCTGGTGA CGCTTTTTTA
ATTCAAGAGT TAATCAAAGA GGTAAATACA GCCCATTTAG AGTTACATCC AGTAGAGCGA
TTATCAGAAG CGCTAAAAAT TCTCGCCAGC GATACTTATG ATGGTTCGCT TCCACCCTTT
GATGTCATGT TATTAGACTT GTCTTTACCC GACAGCCAGG GTATAGATAC CTTTGTCAGA
GCTAACCGCG AGACAAATCT TCTTCCCATC ATCGTGCTAA CAGGAATAGA TGATGAGAAT
TTAGCACTCA CAGCCATGCA GAAGGGAGCG CAAGATTATT TAGTCAAAGG ACAAGTCACA
GGAGACTTAT TAGTACGTTC CATTCGTTAT GCCATAGAAC GTCAACGAGT AGAAGAAGCT
CTGCGTCACA GCGAGGAGCG GTTTCGAGTG GCGTTGAAAA ACTCACCCAT TTTTGTTTTT
AATCAAGACA GAGACTTACG TTATACCTGG ATTTATAACC CAATTGCTGG GTGGACAGTT
GAGGAAATGT TGGGTAAACA AGACTCTGAG ATTATGTCTG AACAGGATGC CCAATGTCTC
ACCGCCATAA AATATCATGT CCTCACCACA GGTATAGGGA CTCGTCAGGT GGTATCTATC
GGTACTCTTT TAGGTACAAA ATATTATGAT TTAACTGTTG AGCCATTGCG GAATGAGTCA
CAAGACATTG TGGGTATCAC TTGCGCTTGT ATTGACATTA GTGAACGTAA ACTAGCAGAA
GCCAAAATCC GTGAACAAGC TGCCTTATTA GACATCACCA CAGACGGTAT ATGTGTGCGT
GATTTAGAAA ATAAAATTTT GTTTTGGAAC AAAGGTGCAG AAAATCTTTA CGGTTGGCAA
GCCCATGAAG TGATCAGCAA AAACGCTAGT GATCTTTTAT TTCGTGAACC TTCTCTAGAA
GTGGAAACGG CTTTATTAAA TGTTATCTCG CAAGGTAATT GGCAAGGAGA ATTAAACAAA
GTTACCAAAA CTGGTAAGGA AATTGTTGTG GCTAGTCGCT GGAGTTTAGT CTATGACGAG
CAAGGAAAAC CTAAATCCAT TCTCTCTGTA GATACAGATA TTACCCAGAA AAAACATTTA
GAAGCCCAAT TATTTCGTAC TCAACGTCTA GAAAGTATCG GAACTCTAGC TAGTGGCATT
GCTCACGACC TCAACAATAT CTTGACACCG ATTTTGGCAG GAGCGCAATT ATTACCACTC
AAATTTCCTG ACGCAGATGA ACGTACTCAG CATTTACTAG AGATTTTAGA AATCAATGCT
AAACGCGGTG CTGATTTAGT TAAGCAAGTT CTGTCCTTCG CTAGGGGTGT GGAAGGGAAG
CGCATCACTT TACAACTCAA ACATTTAATT GTGGAAGTTG TCAAAATTTT GAAAGAAACA
TTCCCCAAAT CCATCGAAGT TTACACAGAT ATACCAAATG ACTTATGGAT GGTTTCTGGA
GATAGTACCC AACTCCATCA AGTGCTGATG AATCTTTGCG TCAATGCCCG TGATGCTATG
CCTAACGGTG GTACGTTGAC AATCTCTGCT GAGAATCTGT TGATTGATGA AAACTACGCC
CGGATGAACT TGGAAGCCAA ACAAGGCCAC TACATCATGG TTACGGTGTC GGATACAGGA
GTGGGTATTT CTCCAGAAAA CTTAGATAGG ATATTTGAGC CATTCTTTAC TACCAAAGCT
GTAGGACAAG GTACGGGTTT AGGTCTTTCC ACGGTTTTAG GGATTGTCAA AAGTCACGGC
GGTTTCGTCA ATGTCTATAG TGAAGAAGGA CGTGGTACTA CCTTTAAAGT TTACTTACCA
TCTGTGGGTG GTATGGAAGC ACCCCATATA GATCATCTAT TACCGCCGGC TGGTCATGGA
GAATTAATCT TGATTGTTGA TGATGAAGTA TCCATCCAAG ATATTACGAA AACATCCTTA
GAAAGTCATC AATATGAGAC TTTAGTTGCT AATGATGGAG TAGAGGCGAT CGCTCTCTAT
GCCAAAAATG CCGATAAAAT TAGTGCTGTA CTCATGGATA TCATGCTACC AGTACTCGAT
GGCTTAACCA CTATTCGCAC TTTGAGGAAA ATTAATCCCC AAGTCAAAAT TATTGCTACC
AGTGGACTCA TATCGAAAAA TAAGTTAACC GAAATAGTCA ATACAGGTGC TAACTCATTC
TTAGCCAAGC CTTACACAGT CAATGAGTTA TTATTGGCTT TGCATGAAGT GATGATTTAG
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| Protein sequence | MADEIIKVLL VEDNPGDAFL IQELIKEVNT AHLELHPVER LSEALKILAS DTYDGSLPPF
DVMLLDLSLP DSQGIDTFVR ANRETNLLPI IVLTGIDDEN LALTAMQKGA QDYLVKGQVT
GDLLVRSIRY AIERQRVEEA LRHSEERFRV ALKNSPIFVF NQDRDLRYTW IYNPIAGWTV
EEMLGKQDSE IMSEQDAQCL TAIKYHVLTT GIGTRQVVSI GTLLGTKYYD LTVEPLRNES
QDIVGITCAC IDISERKLAE AKIREQAALL DITTDGICVR DLENKILFWN KGAENLYGWQ
AHEVISKNAS DLLFREPSLE VETALLNVIS QGNWQGELNK VTKTGKEIVV ASRWSLVYDE
QGKPKSILSV DTDITQKKHL EAQLFRTQRL ESIGTLASGI AHDLNNILTP ILAGAQLLPL
KFPDADERTQ HLLEILEINA KRGADLVKQV LSFARGVEGK RITLQLKHLI VEVVKILKET
FPKSIEVYTD IPNDLWMVSG DSTQLHQVLM NLCVNARDAM PNGGTLTISA ENLLIDENYA
RMNLEAKQGH YIMVTVSDTG VGISPENLDR IFEPFFTTKA VGQGTGLGLS TVLGIVKSHG
GFVNVYSEEG RGTTFKVYLP SVGGMEAPHI DHLLPPAGHG ELILIVDDEV SIQDITKTSL
ESHQYETLVA NDGVEAIALY AKNADKISAV LMDIMLPVLD GLTTIRTLRK INPQVKIIAT
SGLISKNKLT EIVNTGANSF LAKPYTVNEL LLALHEVMI
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