Gene Ava_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4329 
Symbol 
ID3680763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5425029 
End bp5425946 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content48% 
IMG OID637719677 
Producttaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_324822 
Protein GI75910526 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAC AATACTTTGA TATCAAACCA ATTGCTGGAC GTATCGGTGC GAAGATTATT 
GGTGTTGACT TGAGTACTAA CCTCAGCGAT GAAATTATCA GCGATATCCG CAAAGCTTTA
GTTAAACACA AAGTCATTTT CTTCCGTGGT CAAAATATCG ATGCTAATCA ACAAGTAGCC
TTTGCGCGTC GGTTTGGGGA AGTGACTACA GCACATCCTA CTGTCCCTTC ACTACCAGAT
AATCCAGAAG TGCTGGATTT AAACTACGGC AAAACCGTAG CGCGGGCGAA TAACTGGCAT
ACGGATGTCA CCTTCGTAGA CAGTCCACCG CTTGGTTCTG TATTGCGGGC GCTGGTGATT
CCCCCATCTG GTGGTGATAC CATTTGGGCA AACTCTGTGA CTGCATACGA AGATTTACCA
ACTCATCTAC GTAATCTTGC TGATCAACTC TGGGCAGTAC ACAGCAACGC CTACGACTAT
GCCGCAGCAA CAGTTGATCT GCCAGAAGAA GTAAGAGCTT ATCGGGCTGT CTTCACTTCA
ACAGTGTATG AAACTTTACA CCCAGTTGTC CGCGTCCATC CTGAATCAGG GGAACGTGGG
TTATTTATTG GTGGTTTCGT GCGCCGCATT CGTGGTTTAT CACAAAATGA ATCCGACGAA
ATCGTGAAAT TGCTGCAAGC TTACGTCACC CGTCCAGAAA ATACCGTGCG GTGGCGTTGG
CAAGTCGGTG ATGTCGCATT TTGGGATAAC CGCGCTACTC AACATTATGC GATCGCAGAT
TACGGCAATC AACCACGTCA CGTCCAACGT GTGACCATTG TCGGCGATAT CCCCGTCGGT
ATCGATGGTA GGCAGAGTGA AGCCATCAAG GGCGATTCAT CTGCATACAA CCGCCGCGAA
CCAGCTTTAG TTTCCTAG
 
Protein sequence
MGSQYFDIKP IAGRIGAKII GVDLSTNLSD EIISDIRKAL VKHKVIFFRG QNIDANQQVA 
FARRFGEVTT AHPTVPSLPD NPEVLDLNYG KTVARANNWH TDVTFVDSPP LGSVLRALVI
PPSGGDTIWA NSVTAYEDLP THLRNLADQL WAVHSNAYDY AAATVDLPEE VRAYRAVFTS
TVYETLHPVV RVHPESGERG LFIGGFVRRI RGLSQNESDE IVKLLQAYVT RPENTVRWRW
QVGDVAFWDN RATQHYAIAD YGNQPRHVQR VTIVGDIPVG IDGRQSEAIK GDSSAYNRRE
PALVS