| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4325 |
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| Symbol | |
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| ID | 3680759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5415312 |
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| End bp | 5420276 |
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| Gene Length | 4965 bp |
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| Protein Length | 1654 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637719673 |
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| Product | Signal transduction histidine kinase |
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| Protein accession | YP_324818 |
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| Protein GI | 75910522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC CCCGGTTACA TTTGTTTGAT CATAATCTGC AAAAACCACT GGTCATGATG
GCATCGAATA TACCAGTGGC TGAAGCGATC GCGCAAATGT ATCAAGCCCA AACTAGTTGT
GTGCTAGTTA TTGCCAAGCA TGAATTAAGC GGGATTTTGA CGCAAACAGA TGTCTTGAGA
GGAATTGCCA ATCAAATGAT GTTTGCAGAT TTGACAGTTG GAGAACTCAT GAGCCAACCT
GTCATAACTG TTCATGAGAC AGAGCTTGAG AATTTACCAA ATATATTACA ACGCTTCCAT
CAGCATCAAA TTCGCCATTT GCCTGTGCTT GATGATCAGG GACAGGTGCA ATGTGTGGTC
ACACTAGAAG AAGTCAAAAC AGCGCAACTA GAACAAGAAG TAGTGCGACG AGAGCAAATG
TCTCAGTTGC TGTTACAAAG GGATGCTCAG TATCAAACCT CGGAAGCAAA ATTCAATGAT
ATTCTCAATA GCGCAATCAG TACTTGTATC GTGAGTTTTC GAGTATTTAC CAATTTTGAC
TGGGAATATA TATATCATTC TGTAGGTTGT GAAACAGTCT TTGGTTATCC ATCGCAGGAA
TTTTTCAGCA ATAAGCACTT GTGGTTGTCA CAAGTACACC CTGACGATGT AGAAACAGTA
ATTATGCCTG GGTTTGCAGA TATATTTGCA GCCAAAACAT TCGATTTTGA ATACCGATTC
AAGCACAAAG ATGGTTCTTT GCGTTGGATT GCTGCTACCC ATAGTTCTCG ATACGACCCA
AAAGCAGACT GTTGGGTCGT CACAGCCACT AATATTGATA TTAGTGAACG CAAACAAGCA
GAAGCAGCCT TACGCAAAAG TGAAGAACGA TGGCAATTAG CGATCGCCGG CACTGATGAA
GCCATTTGGG ACTGGGATAT ACTGACTAAT CATACCTATC GTTCAGACCG TTGGTTTGAG
ATGCTAGGCT ATGAACGTCA TGAAATGAGT AGCTTTGATG ATGAATGGAG TATCCGCATT
CATCCTGATG ATTATGACCG AGTGATGGCT GCTCAAGCAG CTTATCTGCG TCGGGAAGTT
CCATCATATT ACACTGAGTA TCGTCTCCGG TGCAAAAATG GTAGCTACAA ATGGTTTCGT
TCACGGGCTA AAGGGGTTTG GGATGAACAA GGCAACCCCA TAAGATTGGT CGGTTCTTTG
GGTGATATTA CTGGACGTAA AAGTATTGAA TTAGATTTGA TACGTTCAGA AACTCAATAT
CGATTGCTGT TTGAGAACAA TCCCAATCCC ATGTGGATTT TTGATCCAGA AACTCTAAGT
TTTTTGGCTG TCAATCAGGC AGCAATTTAC AAATATGGCT ATTCTCAAGC AGAATTTCTG
TCAATGACAG TTCTAGATAT TCGCCCCCGT GAAGAAGTTC CTGCTTTTTT TCGCTCCCTG
AATGATTTTG ACATTTTCTC TGCTGTTATT TACGTAGGTG AAGCAAAACA CTGTACAAGA
AACGGAACCT TAATAGATGT GGAAATTAAC TCCCATCTCA TCACTTGGTT GGGGAAACCA
GCAAAATTTG TCCTTGCCAA AGATATTACA GAACAAAAAG TCGCACAGCA TGAACTCCAA
AGAATTGAGG CAGAACTGCG GGAGAGTAAA CATTTTATTG AGCAAGTTAT TAGTCATTCT
CCCCAAATTT TATACATTTT TGACCCAATG GTCGGAAGTA ATGTTTATCT CAACCGCCAG
TCTGTAGATA TTCTGGGTTA TACACCGGAA GAAATTCAGC AACGAGGCGC TCAGTTCTTC
TTGGATGTTT TGCATCCTGA TGACTTACCT CTACTGGAGC GTAACCTGGA ATACTGGCAA
AATGCCGGCG ATGGCGAAGT GCTAACGACC GAGTGTCGTA TGAAACATCA AGACGGGTCT
TGGCGGTGGT TAAGGTCGCG AGAGGTAGTA TTTGCTAGGG ATGAAAATAA CCGCCCTAAT
AAAGTTCTGG GTACAACTCA AGATATTAGT GATAGCAAGC TGGCTGAATT AGAAATTGTC
CATAGTCGGG ACTTACTAGC AGGTATTTAT AATGAATCTG CCGATGCTCT GTTTCTTGTA
GACACTACAA CACTGTTAAC GACTGATTGC AATCAAAGGG CTGTGGAACT ATTTGCAGCC
TCTAGTAAAG CAGAACTCAT TGGTATTGAA GGTCAAACTT TGCAAAAACG ACAGTTTACC
CATGATGAGT TAACTAGCAT TGTTGCAGAA ATTAATCACA GAGGATTTTG GGGTCAAGAA
ATTGAATACA TAACCAAGCA AGGTGATTCC TTTTGGGGAA ATCTAGCCAT TAAACAGATT
TGCGTTGCTG GTCAGGCAAT AAATTTAGTC CGTGTTACAG ATATTAGTCA ACGTAAACTC
GCAGAAATCG CCTTCTATGA GCGAGAAACG ATGTTACGCA GTATTGGCGA TAATTTACCT
AATGGGGCAG TGTATCAAAT TGTCCGCGAA TTGGATGGGA GCGATCGCTT CTCCTACTTT
AGTGCGGGAA TTGAAAGATT AATGGAAGTG AGAGCAGAAG ATGTCAGTGC AGATGCAACT
CTGCTTTATC GTCAGTTATG TGCAGAAGAT ATTCCCGGCT TTGTGCAAGC TGTTGAGGAG
TCATATCGTC ATCTCTCAGT ATTTGACATC CAACTACGAG TCTGCACTCC TAGTGGTATG
TGGAAATGGG TTCAGTTACG TTCTACACCC CGTCGATTAC CAGATGGTCG TGTAGCTTGG
GACGGACTGA TTGTTGATGT AACAGACATC AAGCACACGG AAGAAACACT ACGCCAAAGT
GAAGCACTAT TGGCAGAATC CCAGCGAGTT GCTCGTCTTG GTAACTGGGA TTATGATTTA
GCTACCCGGA AAATAACTTG GTCACAGGGA TTATTTGAGC TATTTCAGCG AGATCCTGCA
TTGGCAGCAC CAAGCTATGA GGAAAATCTC CAACTTTACC ACCCGGAGGA TCAACAGAAA
CTACACCAAG CGGTGGAACG GGCAATATCC ACAGGGGCAT CTTACAAATT GATTCTGCGT
GCATTCAAGG CCGATGGCTC TATGATTTAC GTTGAAGGCC TTGGACACGC ACAGTTTAAT
CCACAAGGAC AAGTAATTGG TCTGTACGGA ACGGCTCAAG ACATCACCAA CCGCAAACAA
GCCCAAGAAG CTTTAACTAA AAGTGAAGAA CAATTACGAC TGACCCTAGA ATATACCCAC
ATTGGTAATT GGGACTGGAA TCTTCACACT AATGAAGTCA TCTGGAACTA TAACCACTAT
CGTTTGTTAG GGTTAGATCC AGAAACATCA ACAGCAAGTT ATCAAGCGTG GCGTGAAGTT
GTTCACCCAG ATGACATTAA CCGCGTTGAG CAGAGTGTGG CTAATGCTCT AGAACAGCAT
AGCAATTTTG AAGCAGAATA TCGGGTGATT CGTCCTGATG GCAGTGTGCT TTGGCTGGCG
GGGAAAGGAC ACGGAATTTA TGATGAAACA GGCAACCCTG TAAGAATGTT GGGTGTGATC
ATAGATATTA ATGACCGCAA ACAAACAGAA CAAACACTGC GAGAGAAAGA GCATTTTTTA
AGCAGTATCT ATGATGGCGT TGGCAATTGT ATTTTTGTTG TGGATGTTGT AGATGATGAT
TTTCGTTTTA TGGGTTTAAA CCCGGCTCAT GAGCAACTAA CAGGCTTTCG CTCTCATGAA
TTGCAAGGCA AAACCCCAGA GCAGGTACTG TCGCCCATTT TAGCGGCATC TGTGCGGCAG
CATTATCAGG ATTGTGTAGA GGCAGGAGCA ACTATTACTT ATGAAGAAAA CTTCTATCTC
AAAAATCAGG ATACTTGGTG GATTACTAAC CTGACTCCTT TAAGAGATGA AAACTTAAAT
ATTTATCGCA TTATCGGCAG TAGCATCAAT ATTACCGAAC AAAAACGCGC CCAACAAATG
CTAGAGTTAC AAGCTGTCGT CACTCGTAAT ATAGCAGAGG GATTATGCTT AGTCCGCGCT
AGTGATGGCA TGATTGTCTA TACTAACCCC AAATTTGCCC AAATATTTGG TTATGAAGTT
AGTGAATTAA TTGGTCAGCA TATCTCCATT ATTAATTATG AAGATGAGCA TACCAGCGCG
ACAGAAATTT ATGAGGCGAT CGCTGCTGCT GCTATGCTAC ACGGTGAAAC TATCTATGAC
GTCCAAAATG TCAAAAAAGA TGGTACTCCT TTCTGGTGTC GAGCGACAGC ATCTGTTTTT
GAACATCCTG AATATGGCAC CGTTTTTGTC GCTGTCCAAC AAGATATCAC CGAGCAGAAA
CAAGCAGAGG AGAAAATTAA GGCATCTCTC AAGGAAAAAG AAGTCTTACT GCAAGAAATT
CACCATCGGG TGAAAAACAA TTTAGGAATC GTTAGCAGTT TGTTACAGAT GCAATGTAGA
CGTACTCAAG ACCCTCAAGC TAACGCTATC CTGCGAGATA GCCAAAACCG CATCGCTTCA
ATTGCTTTGG CACATGAAAA ACTTTACCGT TCTAATGATT TAGCTAATAT AGATTTTGCC
CAATACATCC CGGATTTAAC AACGCACCTA TTTGACTCTT ATAATGTTAA ATCCAGCTGT
ATTCAACTGA GTATTCAAGT TGAAGAGACT AGCTTAGACC TGGAAACCGC CATTCCCTGC
GGTTTAATTA TCAATGAACT GGTATCTAAT GCCTTGAAAT ACGCTTTTCC CGATAATCGG
GAAGGTGAAG TTCAAGTTCG TTTATACCAA CAAAGCGATC GCACATTGAC ACTTATTGTT
CGAGATAATG GTATTGGCTT ACCTGTGGAA TTCGATAGCA AAAAGACCAA AACACTTGGT
ATAACTCTTG TTCAAGGTTT AGTCAAGCAG TTAAGAGGCA AATTAGAAAT TCAGAGTCAG
TCAGGAACTG AATTTAAAAT TTCTTTTAAG ACAGGTAGGG TATAA
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| Protein sequence | MNIPRLHLFD HNLQKPLVMM ASNIPVAEAI AQMYQAQTSC VLVIAKHELS GILTQTDVLR
GIANQMMFAD LTVGELMSQP VITVHETELE NLPNILQRFH QHQIRHLPVL DDQGQVQCVV
TLEEVKTAQL EQEVVRREQM SQLLLQRDAQ YQTSEAKFND ILNSAISTCI VSFRVFTNFD
WEYIYHSVGC ETVFGYPSQE FFSNKHLWLS QVHPDDVETV IMPGFADIFA AKTFDFEYRF
KHKDGSLRWI AATHSSRYDP KADCWVVTAT NIDISERKQA EAALRKSEER WQLAIAGTDE
AIWDWDILTN HTYRSDRWFE MLGYERHEMS SFDDEWSIRI HPDDYDRVMA AQAAYLRREV
PSYYTEYRLR CKNGSYKWFR SRAKGVWDEQ GNPIRLVGSL GDITGRKSIE LDLIRSETQY
RLLFENNPNP MWIFDPETLS FLAVNQAAIY KYGYSQAEFL SMTVLDIRPR EEVPAFFRSL
NDFDIFSAVI YVGEAKHCTR NGTLIDVEIN SHLITWLGKP AKFVLAKDIT EQKVAQHELQ
RIEAELRESK HFIEQVISHS PQILYIFDPM VGSNVYLNRQ SVDILGYTPE EIQQRGAQFF
LDVLHPDDLP LLERNLEYWQ NAGDGEVLTT ECRMKHQDGS WRWLRSREVV FARDENNRPN
KVLGTTQDIS DSKLAELEIV HSRDLLAGIY NESADALFLV DTTTLLTTDC NQRAVELFAA
SSKAELIGIE GQTLQKRQFT HDELTSIVAE INHRGFWGQE IEYITKQGDS FWGNLAIKQI
CVAGQAINLV RVTDISQRKL AEIAFYERET MLRSIGDNLP NGAVYQIVRE LDGSDRFSYF
SAGIERLMEV RAEDVSADAT LLYRQLCAED IPGFVQAVEE SYRHLSVFDI QLRVCTPSGM
WKWVQLRSTP RRLPDGRVAW DGLIVDVTDI KHTEETLRQS EALLAESQRV ARLGNWDYDL
ATRKITWSQG LFELFQRDPA LAAPSYEENL QLYHPEDQQK LHQAVERAIS TGASYKLILR
AFKADGSMIY VEGLGHAQFN PQGQVIGLYG TAQDITNRKQ AQEALTKSEE QLRLTLEYTH
IGNWDWNLHT NEVIWNYNHY RLLGLDPETS TASYQAWREV VHPDDINRVE QSVANALEQH
SNFEAEYRVI RPDGSVLWLA GKGHGIYDET GNPVRMLGVI IDINDRKQTE QTLREKEHFL
SSIYDGVGNC IFVVDVVDDD FRFMGLNPAH EQLTGFRSHE LQGKTPEQVL SPILAASVRQ
HYQDCVEAGA TITYEENFYL KNQDTWWITN LTPLRDENLN IYRIIGSSIN ITEQKRAQQM
LELQAVVTRN IAEGLCLVRA SDGMIVYTNP KFAQIFGYEV SELIGQHISI INYEDEHTSA
TEIYEAIAAA AMLHGETIYD VQNVKKDGTP FWCRATASVF EHPEYGTVFV AVQQDITEQK
QAEEKIKASL KEKEVLLQEI HHRVKNNLGI VSSLLQMQCR RTQDPQANAI LRDSQNRIAS
IALAHEKLYR SNDLANIDFA QYIPDLTTHL FDSYNVKSSC IQLSIQVEET SLDLETAIPC
GLIINELVSN ALKYAFPDNR EGEVQVRLYQ QSDRTLTLIV RDNGIGLPVE FDSKKTKTLG
ITLVQGLVKQ LRGKLEIQSQ SGTEFKISFK TGRV
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