Gene Ava_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4323 
Symbol 
ID3680757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5412073 
End bp5413290 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content47% 
IMG OID637719671 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_324816 
Protein GI75910520 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTT CCAAATTATC CAGGTCTATA CGCCAACTCG GTACCCATGT ATTAGCAATA 
TTTATAGGAG TTGTGTTAAC GGTTAGCAGT CTGCGTGTTT TGCCATCGCA AGCCGAGCCT
GCACCTAATC CTAGTACAAC TGGATCTGCG CCGGAACTAG TTGCTCAAAG ACAATCACCA
GCAACGGCTG CTATCGGTAA TAGTAGCTTT GTGACAGCAG CTGTGAATCG TGTTGGTTCA
GCAGTGGTGA GGATTGATAC CGAGCGTACA ATTACCCGCC GGGTAGATCC ATTTTTGGAA
GATCCCTTTT TCCGGCGCTT TTTTGGTGAA GGCTTTCAAG GACAGTTGCC ACCAGAACAA
ATGCGTGGTC TAGGTTCGGG ATTTATCATT GATAAAAGTG GCTTAATCTT GACTAATGCC
CATGTGGTAG ATAAGGCCGA TCGCGTGACT GTTCGCCTGA AAGATGGCCG TAGTTTTGAT
GGTAAGGTGC AAGGCATTGA TGAAGTCACA GATTTAGCGG TGGTGAAAAT CAACGCGGGT
AATAGTCTAC CAGTTGCACC TCTGGGTTCT TCTAATAATG TCCAAGTGGG CGACTGGGCG
ATCGCAGTTG GTAATCCTTT GGGCTTTGAT AATACTGTGA CTTTAGGTAT TGTCAGCACC
CTCAAGCGTT CTAGCGCCCA AGTGGGGATT ACTGATAAGC GTTTAGATTT TATCCAAACT
GACGCAGCCA TTAACCCTGG TAACTCTGGT GGCCCTTTGT TAAATGACAA GGGTGAAGTG
ATTGGGATCA ACACCGCCAT CCGTGCTGAT GCGATGGGGA TTGGGTTTGC CATTCCTATT
GATAAAGCTA AGGCGATCGC TACTCAATTG GAACGGGACG GTAAAGTTGC TCACCCCTAT
TTAGGTGTAC AAATGGCAAC TTTAACACCC GAATTAGCTC AACAAAATAA CGTTGACCCC
AATTCGGCTT TTGCAATTCC CGAAGTTAAC GGTGTTTTGG TGATTCGAGT AGTACCTAAC
TCCCCGGCTG CTAATGCTGG TATCCGACGC GGTGACGTGA TTCTGCAAGT AGATGGTCAA
GCAATCACCA CTGCGGAACA GTTACAAAAT GTAGTGGAAA ATAGCCGCCT TGGTCAAGCG
CTACAAGTGA GATTGCAACG GGGTAATCAG ACACAGCAGT TATCCGTACG TACTGCTGAA
TTGCAAAATG CTGCTTAG
 
Protein sequence
MRFSKLSRSI RQLGTHVLAI FIGVVLTVSS LRVLPSQAEP APNPSTTGSA PELVAQRQSP 
ATAAIGNSSF VTAAVNRVGS AVVRIDTERT ITRRVDPFLE DPFFRRFFGE GFQGQLPPEQ
MRGLGSGFII DKSGLILTNA HVVDKADRVT VRLKDGRSFD GKVQGIDEVT DLAVVKINAG
NSLPVAPLGS SNNVQVGDWA IAVGNPLGFD NTVTLGIVST LKRSSAQVGI TDKRLDFIQT
DAAINPGNSG GPLLNDKGEV IGINTAIRAD AMGIGFAIPI DKAKAIATQL ERDGKVAHPY
LGVQMATLTP ELAQQNNVDP NSAFAIPEVN GVLVIRVVPN SPAANAGIRR GDVILQVDGQ
AITTAEQLQN VVENSRLGQA LQVRLQRGNQ TQQLSVRTAE LQNAA