Gene Ava_4314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4314 
Symbol 
ID3680826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5404612 
End bp5405892 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID637719662 
Productankyrin 
Protein accessionYP_324807 
Protein GI75910511 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.327235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA ACGATGTTTT GCTGCTAAAG GTGGCGAAGA GTGGCGATAT CAAGGGATTG 
GGTGCGCTAC TGGCTGCTGG TGTTGGGGTG GATGTATGCG ATCGCGACGG AACTACAGCG
CTGATGTTTG CTGCTAATCT AGGGTACACG GAAATTGTGC GATCGCTTTT AGATGGGGGG
GCTAATGTCA ATTTAGCTAG AAAACGCTAT GGTTTGACGG CTTTGATGTT AGCGGCTAGT
GCTAATCAAG TTGATATTGT GCATCTGTTA ATTTCTAGAG GTGCGGCTGT TAATGCTACT
AATGAAGATG GTAGTACGGC TTTAATGGCA GCAGCCATGA AAGGTTATGT AGAAGTGGCG
CGGGTTTTGT TAGCGGCTGG TGCTGATGTC AATATCACCG ATAAAGATGA TGATACTGCT
TTAAAACTAG CTGTGAAGCG AGGACAAGCG GATGTAGTGC AGTTAATTTT ACAAAGTGGT
GCAGACGCTA ATTCTGAAGA TGAAGAAGGC GAAACCCTGT TAATGTTAGC AGCCGACTCA
GGTCATGGGG ATGTGGTACA AGTGCTGCTG GCTACTGGGA TTGATGTTAA CCAACAAAAC
CAAGATGGTG GTACAGCATT GTTAGCAGCT GTAGCAGCAG GAAATCGAGC GATCGCCGAA
ACTTTACTAG ATAGAGGGGC TGAGGTCAAT CACCAAGACC AAGATGGTGA ATCTGCCCTA
CACCTTGCCA CAGTAGAAGG TTACGTTGAT GTGGTACAAC TGCTACTGAA TCAAGGCGCA
AATACCCAAA CTAAAAACAA ACTCGGCGAT ACGCCCTTAT TGGTAGCAGC ATTACAGGGA
CATGATCAGA TAGTCGAAAC ACTACTGAAA TACGGCGCAA ATGCAGATGG AGATAATTTA
GGTGAGACAC CTTTAACCCT AGCCGCATCC CAAGGCCACA CAGCAACCGT CAGGATATTG
TTAGACTACG GCGCTAATGC GAATATTCGC GCCAGTGATG GTAAAACAGC CTTGATTAAA
GCCACTGAAC ATAACCATCC AGGGGTAATA CAGTTATTGC TGGCGAAAGG TGCGAATGTC
AATTACCAAG ACTCTGTAGG AGCTACAGCT TTAATCTGGG CTGCTTCTGG GGGTTATAAC
AAGGTGGTGC AAATATTACT GGAAGGCGGG GCTGATACAA ATTTGAAAAA CCGGGGTGGT
TACACAGCTT TGATGATTGC TGAGTTTAAC GGCTTTAGGA GTATAGTCCA GATTCTCAAG
CAGGCTGGGG CGCAGGAGTA A
 
Protein sequence
MTNNDVLLLK VAKSGDIKGL GALLAAGVGV DVCDRDGTTA LMFAANLGYT EIVRSLLDGG 
ANVNLARKRY GLTALMLAAS ANQVDIVHLL ISRGAAVNAT NEDGSTALMA AAMKGYVEVA
RVLLAAGADV NITDKDDDTA LKLAVKRGQA DVVQLILQSG ADANSEDEEG ETLLMLAADS
GHGDVVQVLL ATGIDVNQQN QDGGTALLAA VAAGNRAIAE TLLDRGAEVN HQDQDGESAL
HLATVEGYVD VVQLLLNQGA NTQTKNKLGD TPLLVAALQG HDQIVETLLK YGANADGDNL
GETPLTLAAS QGHTATVRIL LDYGANANIR ASDGKTALIK ATEHNHPGVI QLLLAKGANV
NYQDSVGATA LIWAASGGYN KVVQILLEGG ADTNLKNRGG YTALMIAEFN GFRSIVQILK
QAGAQE