Gene Ava_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4311 
Symbol 
ID3680823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5401829 
End bp5402746 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content48% 
IMG OID637719660 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_324805 
Protein GI75910509 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCT GCTTGAGAGC AACTATCAGT TACTTAAAAC CACAAAAGGC ATTTTGCTAT 
TTCAGCACAA GCAAGTTTTA TTGGCTACTT ATGTTATCCT CTACAACTAT GTTTGTTGAC
TCGCTGGCTG TAGTAGCGAT CGCCACACCA CAACAAATTG CCCAACAAGT TGTCATCAAC
CGGCCTACCC TTAAGATTGG TAGTCAAGGT GAACGTGTCT CGGAACTTCA AGCGGCGCTG
AGGCTTTTGG GCTTTTACTC AGGTGCAATC GATGGAGTCT ACAACGAGAA TACGGCCAAT
GCTGTGTCTG GGTTCAAACA AGCAGCTGGC TTAACTCCAG ATGGTATTGT CGATGCTATT
ACTTGGCAAA GGTTGTTTCC TAGTCAAGCA ATAGGTACGC CAGTCACCTC TGTACCAAAC
TCAACACCCA ATCCACCAGC CAGTTCAACC ACTGGTTTCC CTGTCCCCAC CCAACCTGTT
ACCACTCCCA CTGTTAACCC CAGACCAACA ACACCCAATC CACCAGCTAA CACCAGACCT
GAACCTAGAC TGGCTAATCC TAGACCTACG CCTCCCAGAC CAACAACGCC AACCCCAAGA
CAACAAACCC CTCAAAGACC ATCTTCCACC CCACGTTTCG CCCCTACACC ATCTGCTCAA
AGAATTTCTG GTATACAATA CACCTCCGAA GGCTGGCCGA TTTTGCGTGT AGGAATGAAG
AATTCCGAAG TTACCAAGCT ACAGCAAAGA TTGAGTCAGC TTGGTTTTTT AAAGGGTGGT
GTGGATGGAT ACTTTGGGGT TCAGACTGAG GAAGCGCTCA AAGCTGCTCA AAGACGCTAT
GGTATAGAAC CTGACGGCGT GGCTGGTGGT GCTACTTGGG AGGCGTTATT GCGGCGCTCA
TCTTCTCAAG GACGATAG
 
Protein sequence
MKGCLRATIS YLKPQKAFCY FSTSKFYWLL MLSSTTMFVD SLAVVAIATP QQIAQQVVIN 
RPTLKIGSQG ERVSELQAAL RLLGFYSGAI DGVYNENTAN AVSGFKQAAG LTPDGIVDAI
TWQRLFPSQA IGTPVTSVPN STPNPPASST TGFPVPTQPV TTPTVNPRPT TPNPPANTRP
EPRLANPRPT PPRPTTPTPR QQTPQRPSST PRFAPTPSAQ RISGIQYTSE GWPILRVGMK
NSEVTKLQQR LSQLGFLKGG VDGYFGVQTE EALKAAQRRY GIEPDGVAGG ATWEALLRRS
SSQGR