Gene Ava_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4309 
Symbol 
ID3680821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5398919 
End bp5400160 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content45% 
IMG OID637719658 
Productpeptidase M16-like 
Protein accessionYP_324803 
Protein GI75910507 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCCAG CCTCAGTGTT TCGATTAGAC AATGGTTTAA CATTTATTCA TCAAGAAATC 
CCCACCACGC CCGTAGTTGT GGCTGATGTT TGGGTGAGAG CTGGAGCAAT TCGTGAGCCA
GAACCTTGGT TTGGAATGGC ACACTTTCTA GAACACATGA TTTTTAAAGG CACGGCGACC
TTACCCCCAG GAACTTTCGA CCATCAGATT GAGAACAGAG GTGGAGTCAG TAATGCAGCT
ACCAGCTACG ATTATGCTAA TTACTCTTTG ACTACAGCCG CGCCTTACTT GGGAGATACC
CTACCTTACT TGGCAGATTT ACTATTGAAT GCGGCAATCC CAGATGATGA GTTTAGCCGA
GAGCGAGATG TAGTGCTAGA AGAAATTCGG GCTTGCTATG ATGATCCTGA CTGGGTAGGA
TTTCAGTGTT TGTCGCAAAG CATCTACCAA GACCATCCTT ATGGGCGTTC AGTTCTGGGT
ACCGAGGAAG AACTGATGCA GCAATCACCA GAGGCTATGC GCCGTTTTCA TCGCGCTCAC
TACCAACCGG AAAATATGAC AGTAGTGATT GCTGGAGGTA TAGCCCAACA ACCAGCCTGG
GAACTGGTAA ACCGTTCATT TGAGAATTTT TCTGAGCCTG TTGAATGTCC AAAAATCAAC
CCAAAACCCA AGCCAATAAT TAAGGGAATT CAACGTCAAG AATTGAGTTT ACCACGCATA
GAGCAAGCCC GATTGTTGAT GGCATGGGTT GTACCAGGAG TGGAAAAACT GCGTACAGCC
TACGGCTTAG ATTTGTTGTC AGTGGTATTA GCAGAAGGGC GGACTTCTCG CCTAGTCAGG
GATTTGCGAG AAGAACTACA ATTAGTCCAA GGAATTTGTA GTAATTTTTC TCTGCAATGT
GAATCGAGCT TGTTTACAGT TACTGCTTGG TTGGAACCGG AAAACCTAGA ACAAGTCGAG
GATTTAATTC TGAGTCATTT AGATGATATC CAAACCAGTG GTGTTACCGA ACAAGAAATA
GCTCGTACCC GCAGACTTTT ATGCAACGAG TACGCCTTCT CTACAGAAAC CCCCAACCAG
CTGACAGGGC TTTATGGCTA CTACAACACC ATCGCTCAAG CAGAATTAGC AGTCACATAT
CCACACCAAA TTCAATCATT TGATACACAA GAACTGCAAC AATTAGCTAA ACAGCATCTT
TCTCCCCAGA ATTACGCTGT TACCATCCTT AAACCTCTGT AG
 
Protein sequence
MFPASVFRLD NGLTFIHQEI PTTPVVVADV WVRAGAIREP EPWFGMAHFL EHMIFKGTAT 
LPPGTFDHQI ENRGGVSNAA TSYDYANYSL TTAAPYLGDT LPYLADLLLN AAIPDDEFSR
ERDVVLEEIR ACYDDPDWVG FQCLSQSIYQ DHPYGRSVLG TEEELMQQSP EAMRRFHRAH
YQPENMTVVI AGGIAQQPAW ELVNRSFENF SEPVECPKIN PKPKPIIKGI QRQELSLPRI
EQARLLMAWV VPGVEKLRTA YGLDLLSVVL AEGRTSRLVR DLREELQLVQ GICSNFSLQC
ESSLFTVTAW LEPENLEQVE DLILSHLDDI QTSGVTEQEI ARTRRLLCNE YAFSTETPNQ
LTGLYGYYNT IAQAELAVTY PHQIQSFDTQ ELQQLAKQHL SPQNYAVTIL KPL