Gene Ava_4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4307 
Symbol 
ID3680819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5396660 
End bp5397208 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID637719656 
Productpentapeptide repeat-containing protein 
Protein accessionYP_324801 
Protein GI75910505 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.154552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAAG AGCTGCAAGT GGTCATAAAA AATGCCGTAG TTGTAAATGC AATCATCAAA 
AAGTTTTACT GGCAAACAAT AACTTTAATT TTGGGGATAG TTGTACTGTG CTTTCCCTAC
CCAGCTATAG CCGACTGGAC TCATCCTCTA TCATTTAGTA ATGCCGAATT ATCTAGGCAC
AACTTTGCTG GTGAAAGTTT GCAAGCTGCT GAGTTTTCTA ACGCCAATCT GGAAATGACT
AACTTTGTCG GTGCTGACTT ACGTGGTGCA GTCTTAAGTG CTTCCGTGAT GACACAAGCA
AATCTCCAGG GAGCAGATTT AACGAATGCG ATGGTTGATC AGGTAAACTT AACAGGGGCT
AATTTAAGTG ATGTCGTTCT TAAAGAAGCT CTTTTACTCC GTGCCATATT CGCTAACGTG
AACATAGAAG GCGCAGATTT TACGGATGCA ATTTTGGATA AAGCACAAAT TAAAGAACTT
TGTACCAAAG CTAGCGGAGT AAATACAAAA ACTGGTGTAA AAACTCGTGA TTCTTTGGGA
TGTCAATGA
 
Protein sequence
MGEELQVVIK NAVVVNAIIK KFYWQTITLI LGIVVLCFPY PAIADWTHPL SFSNAELSRH 
NFAGESLQAA EFSNANLEMT NFVGADLRGA VLSASVMTQA NLQGADLTNA MVDQVNLTGA
NLSDVVLKEA LLLRAIFANV NIEGADFTDA ILDKAQIKEL CTKASGVNTK TGVKTRDSLG
CQ