| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4303 |
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| Symbol | rpsD |
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| ID | 3680815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5391503 |
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| End bp | 5392111 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637719652 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_324797 |
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| Protein GI | 75910501 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000344205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGAT ATCGAGGGCC ACGTCTTAGA ATTGTACGTC GCTTGGGCGA TTTGCCAGGA
TTAACTCGTA AGAGCGCTAG ACGCGCTTAT CCACCAGGTC AGCATGGTCA GAACCGCAAA
AAGCGCTCTG AGTATGCTAT CCGTCTAGAA GAAAAGCAAA AACTGCGTTT AAACTACGGT
TTGACTGAAA AGCAACTGTT ACGCTATGTG CGTCGCGCTA GACGTGTAAC TGGTTCTACC
GGACAAGTGC TGCTGCAACT GTTAGAAATG CGCTTGGATA ATACGGTTTT TCGTTTGGGT
ATGGCTCCCA CAATTCCAGC CGCTCGTCAG CTGGTAAATC ATGGTCATGT CACAGTTAAC
GGTCGTGTAG TCAACATTGC CAGCTACCAA TGCCGTCCTG GCGAAGAAAT TGCTGTCAGA
GACAAAGCAC CATCACGGAA ATTGGTAGAA AATAACCTAC AATATCCGGG TTTAGCTAAC
CTCCCCAGCC ATTTAGAGTT TGATAAAAAC AAGTTGGTTG GTAAAGTTAA TGGTGTCATT
GAACGTGAAT GGGTGGCGCT GCAAGTTAAC GAACTGCTAG TTGTGGAATA CTACTCCCGA
CAAGCGTAA
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| Protein sequence | MSRYRGPRLR IVRRLGDLPG LTRKSARRAY PPGQHGQNRK KRSEYAIRLE EKQKLRLNYG
LTEKQLLRYV RRARRVTGST GQVLLQLLEM RLDNTVFRLG MAPTIPAARQ LVNHGHVTVN
GRVVNIASYQ CRPGEEIAVR DKAPSRKLVE NNLQYPGLAN LPSHLEFDKN KLVGKVNGVI
EREWVALQVN ELLVVEYYSR QA
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