Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4295 |
Symbol | uvrC |
ID | 3680846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5381332 |
End bp | 5383215 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719644 |
Product | excinuclease ABC subunit C |
Protein accession | YP_324789 |
Protein GI | 75910493 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAACAT CTGCTCAGAT ACTACCACTG GTGAAAGATC CAGAGCGTTT AGAAGCCCGT CTGTCCGAAA TTCCACCGGA ACCAGGGGTT TATTTCATGC GAGATGGGAG CGATCGCATA ATATATATAG GGAAATCACG GAAATTGCGA TCGCGGGTTC GTTCCTATTT CCGCGAAGGG TACAACAAAA CTGAGCGCAT AGCCACCATG GCCAAGTTGG TGACAGAAAT TGAGTTTATT GTCACCGATA CCGAAGCTGA AGCCTTGGCG TTAGAAGCCA ACTTAATCAA GCAGCATCAG CCATACTTTA ATGTGCTGCT CAAGGATGAT AAGAAGTATC CCTATGTCTG TATTACATGG TCAGAAGACT ATCCGCGCAT TTTCATTACC CGAAAACGAC AACTAGGTAA AGAAAAAGAT AAATATTACG GGCCTTATAC GGATTCAGGT TTGTTAAGGG AAATATTACG TATATCTAAG CGGATATTTG CCCTGAGACA ACGCCCACAG CCATTATTTA AAGACCGTCC TTGCTTAAAT TATGATTTAG GTCGGTGTCC TGGTGTGTGT CAACAGCTGA TTTCCCCAGA AGAATACCGC AAAACTGTGC AGAAAGTGGC AATGGTGTTT CAGGGACGGA CTCAGGAATT GATTGATATC TTGAGTGAAC AGATGGAGAA AGCGGCGGAG GCGTTGAATT TTGAAGTAGC GGCGCGGATT CGTGATCAAA TTGCTGGGTT AAAGTCTCTG ACGGCGGAAC AGAAGGTTTC CTTACCAGAT GATACGGTGT CACGGGATGC CATTGCTTTG GCAGCTGACG CACAACACGC CTGCATCCAA TTATTCCAGA TTCGCGCTGG TCAATTGGTG GGACGCTTGG CTTTTGTGGC TGAATCCCAT GCTGAACCAG GGGCTATTTT ACAAAGGGTA CTAGAAGAAC ATTACCAAAC GGCAGAATCT GTAGAAATTC CCGCAGAAAT TTTAGTCCAG CATGAGTTAC CAGATGCTGA GATATTAGCT GATGTCTTAA CCCAGCGTAA GGGAAGAAAA GTGACAATCT TCACACCCCA GCGCCAAGTT AAGGCAGAAT TAATTGAGAT GGTAGAGCGT AACGCCCAGT ATGAATTGCA AAGAATGCAG AAATTAGGCG ATCGCAATCA CCAAGCAACC CAAGATTTAG CTGCTATTCT CGATTTACCC GACTTACCCC ACCGCATCGA AGGTTATGAT ATTTCTCACA TTCAAGGTTC TAATGCGGTA GCTTCCCAAG TCGTGTTCAT CGATGGATTA CCAGCCAAGC AAAATTATCG CCACTACAAA ATTAAAAATC CCACAGTCAC CATCGGGCAT TCCGACGATT TTGCCAGTTT AGCAGAAGTT ATCCAAAGAA GATTTCGCAA GTATGCAGAA GATCCGCAAT TATCGCGGGT GGGAAATCCT GACTGGCCTG ATTTGATTAT GATTGACGGC GGTAAAGGTC AGTTATCATC GGTGGTTGCT GTTTTGCAAG AGATGAACTT ATTAGAAGAC TTGCGGGTGA TTAGTTTAGC AAAGCGGCGC GAAGAGATTT TCTTACCAGG GGAATCCCAA CCCTTAAAAA CTGATGCTGA ACAACCGGGG GTGCAATTGT TGCGAAGACT ACGGGATGAA GCCCACCGCT TTGCTGTGAG TTTCCATCGT CAGCAACGCA GTGATAAACT GAAGCGATCG CGCTTAGATG AAATCCCTGG TTTAGGACAC CACCGCCAAA AGCAGCTGCT AGCTCATTTT CGCTCCGTTG ACTATATTCG CCAAGCCACA CCTGCACAAA TAGCCGAAGT TCCAGGGATA GGCCCACATC TGGCTCAAGC CATTTACGAC TATTTCCATC CCTCTCATGT CTAA
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Protein sequence | MRTSAQILPL VKDPERLEAR LSEIPPEPGV YFMRDGSDRI IYIGKSRKLR SRVRSYFREG YNKTERIATM AKLVTEIEFI VTDTEAEALA LEANLIKQHQ PYFNVLLKDD KKYPYVCITW SEDYPRIFIT RKRQLGKEKD KYYGPYTDSG LLREILRISK RIFALRQRPQ PLFKDRPCLN YDLGRCPGVC QQLISPEEYR KTVQKVAMVF QGRTQELIDI LSEQMEKAAE ALNFEVAARI RDQIAGLKSL TAEQKVSLPD DTVSRDAIAL AADAQHACIQ LFQIRAGQLV GRLAFVAESH AEPGAILQRV LEEHYQTAES VEIPAEILVQ HELPDAEILA DVLTQRKGRK VTIFTPQRQV KAELIEMVER NAQYELQRMQ KLGDRNHQAT QDLAAILDLP DLPHRIEGYD ISHIQGSNAV ASQVVFIDGL PAKQNYRHYK IKNPTVTIGH SDDFASLAEV IQRRFRKYAE DPQLSRVGNP DWPDLIMIDG GKGQLSSVVA VLQEMNLLED LRVISLAKRR EEIFLPGESQ PLKTDAEQPG VQLLRRLRDE AHRFAVSFHR QQRSDKLKRS RLDEIPGLGH HRQKQLLAHF RSVDYIRQAT PAQIAEVPGI GPHLAQAIYD YFHPSHV
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