| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4287 |
|---|
| Symbol | |
|---|
| ID | 3680838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5372844 |
|---|
| End bp | 5373920 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637719636 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_324781 |
|---|
| Protein GI | 75910485 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCAC AAACTTACAA ATTATTATTT GTGTCCACTC CCATTGGTGC TTTAGGCACA
GGATTAGGAG GCGGAGTAGA ACTTACTTTA TTTAATATTG CACAAGAGTT TTTGCGGCGA
GGACACAAAT TAGAAATAGT AGCACCACAG GGTTCTGCTA TTAGTTCATT ACCCATTAAA
GAAATTCCAG GGGAACTACA ATTATCAGCC CAAAATCAAA ATCGTACCGA CCCAATTTTT
GTCCCGACTA ACTCTGTTTT GGCAAATATG TGGGACTATG CTCGTCAAGT GCAAACAGAC
TATGATTTGA TAGTGAATTT TTCTTATGAT TGGTTACCAT TATATTTAAC ACCATTTTTT
CATCGTCCCA TCGCCCATCT CATCAGCATG GGTTCCTTAA CAGATGTGAT GGACGACATG
ATTGAAAAGG TCGCCAATAA TTTTCCAGGT ACAATTGGTG TCCACGGCAA AACACAAGCC
GCTACTTTTA CATTTGCCGA AAAATGCCAT TGTCTGTTAA ATGGGCTAGA TATATCAGCT
TATACGTTTT GTGGTGAACC AAGTTCTTCC TTAGCATGGG TGGGGAGAAT TGCACCAGAA
AAAGGTCTAG AAGATGCAGT CGCAGCCGCG AACATCACCG GAATTCCCCT GAAAATCTTC
GGTTTGAAAC AGAATGAGGC TTACTGGGAG CAGATTTGTC AAGCATACCC TGACGCACCT
ATAGAATATG TGGGCTTTTT ATCCACCCAT GAACTACAAC ACCAATTAGG TCAGTGTCGA
GCAGTCTTTA TCACTCCCCG ATGGGTTGAG GCTTATCCCA ACGTAGCACT TGAGGCGCTG
GCCTGTGGAG TACCCCTGAT AGCCTATAGT CGGGGTGGTT TAACAGAAAT TGTCCAAGAC
GGCAAAACAG GCTTTTTGGT AGAACCGGAT AGTGTGGAAG GCTTGGTAGA AGCCATTCAT
CGCCTAAATG AAATCGACCG TCGCGCCTGT CGCCAGCAAG CCGAAACTCA ATATTCTTCT
CAAGCTATGG GCGATCGCAT GGAACAATGG TTTAAGAACA TCCTGATGAA ACTTTAA
|
|---|
| Protein sequence | MVSQTYKLLF VSTPIGALGT GLGGGVELTL FNIAQEFLRR GHKLEIVAPQ GSAISSLPIK
EIPGELQLSA QNQNRTDPIF VPTNSVLANM WDYARQVQTD YDLIVNFSYD WLPLYLTPFF
HRPIAHLISM GSLTDVMDDM IEKVANNFPG TIGVHGKTQA ATFTFAEKCH CLLNGLDISA
YTFCGEPSSS LAWVGRIAPE KGLEDAVAAA NITGIPLKIF GLKQNEAYWE QICQAYPDAP
IEYVGFLSTH ELQHQLGQCR AVFITPRWVE AYPNVALEAL ACGVPLIAYS RGGLTEIVQD
GKTGFLVEPD SVEGLVEAIH RLNEIDRRAC RQQAETQYSS QAMGDRMEQW FKNILMKL
|
|---|
| |