Gene Ava_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4281 
Symbol 
ID3680832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5367225 
End bp5368238 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content41% 
IMG OID637719630 
Producthypothetical protein 
Protein accessionYP_324775 
Protein GI75910479 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.939851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.96303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAC TGAAAGCTAC TAACAGCATT GAACAACGTT TGCAAATACA GCGTTTGCAA 
GCGCCAACCC GCGTAGTTAC ATCTACTGCT GGGGGTGATG TGGTAAGGGG GTTAACTCAA
ACACCCAAAA CTTTACCCCC TTGTTATTTC TATGATGACA GAGGTTCTGA ATTATTTGAG
CGTATCTGTG AGTTACCTGA ATATTACGTG ACACGCACAG AAACGGCTAT TTTACAAAGG
TTTGCGGGTG AAATTGCTCG AATTACTGGC GCTTGCGAGT TAGTAGAACT GGGAAGCGGT
AATTCTACCA AAACTCGTAT ATTACTGGAT GCTTATCAGC AACTAGATTA TCCTCTGCGT
TATTTACCGA TTGATGTTTG TGCAGGGATT TTGGAAAGTA GCGCCAAGCA ATTACTTCAA
GACTATCCTT CCCTGGAAGT TTATGCGCTA GCGGGAACTT ATGAATTAGC GCTTGCACAA
CTGACTCCCA AAAAATTATC TAGTAGGATG ATTTGTTTTA TTGGTAGTAC CTTGGGTAAT
CTCAATCTGC AAGAGTGTGA TGTCTTCTTG TCCCAAATTA GAGCAACTTT AAATGTCGGT
GAATATTTTT TATTGGGAGT GGATTTGCAA AAGCCCAAGG AGATTTTGGA ACCAGCCTAT
GACGACAGTC AAGGAGTCAC CGCAGAGTTT AACCTCAATA TGCTGGAACA TTTAAACCGA
AGTTTTGAGG GAAATTTTGA TACGACACAG TTTAAACACT GGGCATTTTA TAATGAGAGT
GAACAGCGCA TTGAGATGCA CTTGAAAAGT GAGCGATCGC AAACTGTCCA ATTAAAGTCT
CTCAATCTCA CTGTTAATCT GGCCCAAGGT GAAACCATCC TCACCGAAAT TTCTCGCAAA
TTTAACCTCG AAAGCATTCA GCAACAACTC GCAGCTAAAG GTTTAATACC TGTTCAGACC
TGGACTGATG TAAATCAGTG GTTTGGTTTA TTGCTGTGTC AAGTGCAAGG ATAA
 
Protein sequence
MSVLKATNSI EQRLQIQRLQ APTRVVTSTA GGDVVRGLTQ TPKTLPPCYF YDDRGSELFE 
RICELPEYYV TRTETAILQR FAGEIARITG ACELVELGSG NSTKTRILLD AYQQLDYPLR
YLPIDVCAGI LESSAKQLLQ DYPSLEVYAL AGTYELALAQ LTPKKLSSRM ICFIGSTLGN
LNLQECDVFL SQIRATLNVG EYFLLGVDLQ KPKEILEPAY DDSQGVTAEF NLNMLEHLNR
SFEGNFDTTQ FKHWAFYNES EQRIEMHLKS ERSQTVQLKS LNLTVNLAQG ETILTEISRK
FNLESIQQQL AAKGLIPVQT WTDVNQWFGL LLCQVQG