Gene Ava_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4279 
Symbol 
ID3680830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5364884 
End bp5365672 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content39% 
IMG OID637719628 
Producthypothetical protein 
Protein accessionYP_324773 
Protein GI75910477 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID[TIGR03442] conserved hypothetical protein TIGR03442 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.927124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGTC TACTTGCCTA CCTTGGTTCG CCTGTTTCTC TGGAATATCT CTTATATAAA 
CCAGAACATT CGCTGATAGT TCAAAGTTAC CAACCCCGTG AAATGACTTC TGGGGTGGTA
AATGCAGACG GCTTTGGTGT GGGTTGGTAT CATAGCCAAA AAGATACTGA ACCTTTTACC
TATAAAAATA CTCTGCCTAT TTGGAATGAT ATTAATTTGC CTAGTCTGAG CCGTTATGTG
GAATCTAAGT GTATTTTAGC TTATGTTCGT AGTGCGACAG CAGGACAAGC TCTAGATTTT
GCCAACTGTC AGCCATTTCA TTATAAGCAA TCCCTATTTA TTCATAATGG TTACATTGAG
AATTTTCGCA AGACCTTACA TCGCAAACTC CGCAGTACTT TAACCCCAGA TTTTTACGAA
CATATCAATG GTAGTACTGA TTCTGAGCAT ATTTTTGCAT TACTACTTTC TCAAATACAA
AGTAATAAAC ATCGTTCTGT AGAGTCGGTT TTACGTAACA CTTTACTAAT GCTGTGGGAG
ATGGCAAAAC GTCATCAAGT TAATGCTTCT GCAAATGTAG TTTTTAGTGA TGGTCATCGC
CTCATCGCCT CCCGGTTTGC TTCATCTTCA TCACCGCCAT CGCTGTATTG GCTCAAAGAT
GATTTGACTT TTCCTAATTC TGTCATTATT GCATCTGAAC CATTGTTTGC AGGTAATTGG
ACTGCTTGTC CAGAAAATAG CATTATCAGT GTGGGAGAGG ATTGTGATAT CAAAATTGAA
AGCATCTAG
 
Protein sequence
MCRLLAYLGS PVSLEYLLYK PEHSLIVQSY QPREMTSGVV NADGFGVGWY HSQKDTEPFT 
YKNTLPIWND INLPSLSRYV ESKCILAYVR SATAGQALDF ANCQPFHYKQ SLFIHNGYIE
NFRKTLHRKL RSTLTPDFYE HINGSTDSEH IFALLLSQIQ SNKHRSVESV LRNTLLMLWE
MAKRHQVNAS ANVVFSDGHR LIASRFASSS SPPSLYWLKD DLTFPNSVII ASEPLFAGNW
TACPENSIIS VGEDCDIKIE SI