Gene Ava_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4277 
Symbol 
ID3680886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5363099 
End bp5363968 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content44% 
IMG OID637719625 
Productaldose 1-epimerase 
Protein accessionYP_324771 
Protein GI75910475 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.436668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAGTA TTGCCATCCA ACAGCAACAG TACAAAACCT ATATCCTTTC TGATGAAACA 
ACTGGCTCTC AACTGGAAGT TGTACCAGAA CGTGGCGGTA TTATTACCCG TTGGCGTGTG
AAGGGAGAGG AAATTCTCTA CCTAGACGCT GAACGTTTCA CTCATCCAGA TTTGAGCGTC
AGAGGTGGAG TACCAATTTT ATTTCCCATC TGCGGCAACT TACCGGATAA TTCTTACACC
CTCAACGGTC AGCAGTACAC ACTCAAACAA CATGGGTTTG CCCGTGATTT GCCCTGGGAG
GTAGTTGAGC AGACCACTAA GGACACTGCT GCACTGACGT TAGTTCTCCG CAGCAACGAA
CAGACAAAGG CGGTTTATCC TTTCGATTTC CAACTAGTAT TCACTTACGT GCTACAAGGG
AATACTCTAG AAATTCGCCA GGAATACCAA AATCTATCAT CTACCCAATT GCCCTTCTCG
GCTGGGTTCC ATCCTTACTT CTTGACTGGG GATAAAAATC AACTGGAGTT CGACATTCCC
TCCCAGGAAT ATCAAGACCA GCAAACAAAG GAAGTTCATC CCTTTAATGG CAATTTTGAC
TTTAACCGTG ATGAAATGGA TTTTGCGTTT GGTCACATCA CCAGCCAGTC TGCTAGTGTA
ATCGACCGTA ATCGGCAGTT TAAACTAACT TTGGATGCTG ATGATATTTT TTCAATGTTG
GTATTTTGGA CGCTGAAGGG CAAAGAATTC TATTGTCTAG AACCTTGGAG CGCTCCTCGT
AACTCCCTGA ATACTGGTGA AAAGCTGACA GTGCTAGAGC CAGGCACTAG CTACAAAGCA
TCTGTAAGAT TATCGGCAAG TTTTTTCTAA
 
Protein sequence
MFSIAIQQQQ YKTYILSDET TGSQLEVVPE RGGIITRWRV KGEEILYLDA ERFTHPDLSV 
RGGVPILFPI CGNLPDNSYT LNGQQYTLKQ HGFARDLPWE VVEQTTKDTA ALTLVLRSNE
QTKAVYPFDF QLVFTYVLQG NTLEIRQEYQ NLSSTQLPFS AGFHPYFLTG DKNQLEFDIP
SQEYQDQQTK EVHPFNGNFD FNRDEMDFAF GHITSQSASV IDRNRQFKLT LDADDIFSML
VFWTLKGKEF YCLEPWSAPR NSLNTGEKLT VLEPGTSYKA SVRLSASFF