Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4277 |
Symbol | |
ID | 3680886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5363099 |
End bp | 5363968 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719625 |
Product | aldose 1-epimerase |
Protein accession | YP_324771 |
Protein GI | 75910475 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.436668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAGTA TTGCCATCCA ACAGCAACAG TACAAAACCT ATATCCTTTC TGATGAAACA ACTGGCTCTC AACTGGAAGT TGTACCAGAA CGTGGCGGTA TTATTACCCG TTGGCGTGTG AAGGGAGAGG AAATTCTCTA CCTAGACGCT GAACGTTTCA CTCATCCAGA TTTGAGCGTC AGAGGTGGAG TACCAATTTT ATTTCCCATC TGCGGCAACT TACCGGATAA TTCTTACACC CTCAACGGTC AGCAGTACAC ACTCAAACAA CATGGGTTTG CCCGTGATTT GCCCTGGGAG GTAGTTGAGC AGACCACTAA GGACACTGCT GCACTGACGT TAGTTCTCCG CAGCAACGAA CAGACAAAGG CGGTTTATCC TTTCGATTTC CAACTAGTAT TCACTTACGT GCTACAAGGG AATACTCTAG AAATTCGCCA GGAATACCAA AATCTATCAT CTACCCAATT GCCCTTCTCG GCTGGGTTCC ATCCTTACTT CTTGACTGGG GATAAAAATC AACTGGAGTT CGACATTCCC TCCCAGGAAT ATCAAGACCA GCAAACAAAG GAAGTTCATC CCTTTAATGG CAATTTTGAC TTTAACCGTG ATGAAATGGA TTTTGCGTTT GGTCACATCA CCAGCCAGTC TGCTAGTGTA ATCGACCGTA ATCGGCAGTT TAAACTAACT TTGGATGCTG ATGATATTTT TTCAATGTTG GTATTTTGGA CGCTGAAGGG CAAAGAATTC TATTGTCTAG AACCTTGGAG CGCTCCTCGT AACTCCCTGA ATACTGGTGA AAAGCTGACA GTGCTAGAGC CAGGCACTAG CTACAAAGCA TCTGTAAGAT TATCGGCAAG TTTTTTCTAA
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Protein sequence | MFSIAIQQQQ YKTYILSDET TGSQLEVVPE RGGIITRWRV KGEEILYLDA ERFTHPDLSV RGGVPILFPI CGNLPDNSYT LNGQQYTLKQ HGFARDLPWE VVEQTTKDTA ALTLVLRSNE QTKAVYPFDF QLVFTYVLQG NTLEIRQEYQ NLSSTQLPFS AGFHPYFLTG DKNQLEFDIP SQEYQDQQTK EVHPFNGNFD FNRDEMDFAF GHITSQSASV IDRNRQFKLT LDADDIFSML VFWTLKGKEF YCLEPWSAPR NSLNTGEKLT VLEPGTSYKA SVRLSASFF
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