| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4267 |
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| Symbol | |
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| ID | 3680876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5348305 |
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| End bp | 5351067 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719615 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_324761 |
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| Protein GI | 75910465 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.427851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.366245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCGA TCGCTAAACC AAATTCTCAG GTTAGTCTCA ATCAGGAAAG TGTAGTACGT
CGTATTACGG CTCGGATTCG TCAATCTTTA GAGTTGGAGG ATATCATCAC AGCGACAACA
GCAGAGGTAC GCACTTTATT GGGAACTGAC CGAGTGATGA TGTATAAATT CCATGCAGAT
GGAAGCGGTC AGGTTATTGC TGAGTCAATT TATGAAAATC GTCTACCCTC ATTGCTGGGG
TTGAATTTTC CGGCTGATGA TATTCCACCC CACGCAAGGG AACTTTTGGT CAAGTCTAAA
GTACGTTCCA TAGTTAATGT TACTACGGGG ATGATTGGTC AAAGCCCTGT GCATAACTTA
GAAACGGGGG AATTAATTTC AGAAGACATT TGTTACCGTC CTGTAGACCC TTGTCATTTG
GAATACTTAA CAGCGATGGG TGTGAAATCT TCGGTAGTCG CGCCTATTTT TCACCAAGAT
GAACTGTGGG GGCTGTTGGT ATCTCATCAT TCCGAAAACC GGACGGTTTC AGAGGATGAG
TTGGAAGCCA TGCAGATGAT TGTAGATCAA CTTGCAGTAG CGATCGCCCA AAGTCATCTC
CTGACCCAAG CCAGAAAAAA AGCCCAAAAA GAAGCCATCA TTAACCGCAT TATTACCCTA
CTGCACTCAT TACCCACGAT TGTCTTACAG CCGACTTTAG AAGCAGCAGT TGCTGCTTTT
GATGGTGTTG GCGGTAGGCT GTGTTTAAGA AATCAAGCTG TTGAGTCACA ACACGTTGCT
TCTCGGAGTT TAGCGGAGTG TTTAATTCCA GGTAATAACT GCGTCCAACT TTATACCTGT
GGACAACAAC CTATCACCCC AGAACAAACT ATCTATCCGC TCATTGAACA GTATAGGGTC
TGGCAGGAAC ATTACACATC GCATCATGAT ATCTGGGCGA TCGCTGATAT TTATCAAGAT
CCTACCTTGC GTAGTTTGCA AGCCGTTTTT CAAACAACTA AAATTCGCAG CATTTTAATC
ATTCCCTTAG AATATCGTCA GCAGTTACTG GGTTATTTAA CTATCTTCCG CAATGAGATA
GATACCGAAA CTCTCTGGGC CGGACACATT GATCAGGATC AGAGGCAAAT GTTCCCCCGT
GTATCATTTA ATTTATGGCG TGATGCCAAA AAGTCACAAG CTCAACAATG GACAAGCGAA
GAGATTGAAC TAGCTAAAGA AATCGGTCAA CACTTTGCCT CAGCTATTCA GCAGTATGAA
CTCTACCAAC AAGTACAAGC CTTTAACGAA AACTTAGAAA AACAAGTGCA GAAACGCACT
CTTGAACTAC GCCATACATC AGAACAACAA CAAGCAGTGT TTGGTGTAAT TTCTAAGATT
CGTGAATCGC TAGATACTAA CACTATTTTT CAAATAACTA CTAAAGAAGC TTGTCAATTA
ATTAAAGCAG ATCGGGTTTC CGTGTATCGC TTTGACGATG AATGGGGAGG CGAATTTGTG
GGTGATTTTG AAGCCACTAG CCTTCACTGG TCAAATGAAT CAAGCATAAG TATTAATACT
GTCTGGAATG ACACTTACTT ACAAAACACA CAAGGAGGAC GCTATCGCTA CAATGAAACA
TTTGCCGTAG ATGACATCTA TAAGGTGGGG TTTACTCAAT GTCATGTTGA AAATCTAGAG
CAATTTCAAA TTTATGCTTT TGTCTTGGCT CCTATCTTTG TTGGTCAGAA ACTCTGGGGT
TTACTAGCAA CTTATCAACA TTCTGGCCCC CGTCAGTGGA AACCTTCAGA AGTGAACTTC
CTGACTCAAA TTGCTGCCCA ACTAGGAGTA GCGCTACAAC AAGCTGAACT ACTCAATCAA
ACCCAGCAAC AGGCTCAAAA GTTAACTCAA ACACTGCACC ATTTACAACA AACCCAAACT
CAACTCATCC AAACAGAAAA AATGTCTTCA TTGGGTCAAT TAGTAGCAGG TGTAGCTCAT
GAAATTAATA ATCCAGTGAA CTTTATTTAT GGAAATCTCA GCCATGTAAG TGAATATGCT
CAGAATTTAC TCACGATGCT GGAACTTTAT CAGCAAGAAT TACCCAACCC TAGTGCAGCA
ATTCTAGAAC AGGCAGACGA AATCGATCTA GAGTTTTTAG CTGAAGATTT ACCCAAAACT
CTCTCCTCTA TGCAAATTGG TGTCGAGCGC ATCCGCCAAA TTGTCATGTC TTTACGGACT
TTCTCTCGCC TTGATGAAGC AGAAATGAAA GCCGTAAATA TTCATGAGGG TATTGATAGT
ACCTTGTTAA TTTTGCAACA CCGCTTGAAA GCCAAGCCGG AAACTGCGGG GATTAAACTT
ACCAAAAAAT ACGCTGATAT TCCCTTGGTA GAATGCTACG CCGGACAGAT GAATCAAGTA
TTTATGAATG TTTTGAGTAA TGCTATCGAT GCTCTAGAAG ATTATAAGGA GGCACAATCA
AAAAATCATC ATGGTGAAAT TATTATTTTT ACTAGCTTTG GTCAAATCAG GGACAACATT
CAAAGTGTAG TCATTCGGAT TGTGGATAAT GGCCCTGGCA TACCAGAAGA TTTGAGACTC
AGAATATGCG ATCCGTTCTT TACTACAAAG CCAGTCGGTA AGGGTACAGG TTTGGGTTTA
TCTATTAGTT ATAAAATTGT AGTAGAAAAA CATGGTGGGG TTTTTAAATG TGATTCTCAA
CTAGGTTCAG GTACAGAATT TTGGATTGAA ATTCCGATTC AGCAGGTTAA TAATAATTGG
TGA
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| Protein sequence | MSPIAKPNSQ VSLNQESVVR RITARIRQSL ELEDIITATT AEVRTLLGTD RVMMYKFHAD
GSGQVIAESI YENRLPSLLG LNFPADDIPP HARELLVKSK VRSIVNVTTG MIGQSPVHNL
ETGELISEDI CYRPVDPCHL EYLTAMGVKS SVVAPIFHQD ELWGLLVSHH SENRTVSEDE
LEAMQMIVDQ LAVAIAQSHL LTQARKKAQK EAIINRIITL LHSLPTIVLQ PTLEAAVAAF
DGVGGRLCLR NQAVESQHVA SRSLAECLIP GNNCVQLYTC GQQPITPEQT IYPLIEQYRV
WQEHYTSHHD IWAIADIYQD PTLRSLQAVF QTTKIRSILI IPLEYRQQLL GYLTIFRNEI
DTETLWAGHI DQDQRQMFPR VSFNLWRDAK KSQAQQWTSE EIELAKEIGQ HFASAIQQYE
LYQQVQAFNE NLEKQVQKRT LELRHTSEQQ QAVFGVISKI RESLDTNTIF QITTKEACQL
IKADRVSVYR FDDEWGGEFV GDFEATSLHW SNESSISINT VWNDTYLQNT QGGRYRYNET
FAVDDIYKVG FTQCHVENLE QFQIYAFVLA PIFVGQKLWG LLATYQHSGP RQWKPSEVNF
LTQIAAQLGV ALQQAELLNQ TQQQAQKLTQ TLHHLQQTQT QLIQTEKMSS LGQLVAGVAH
EINNPVNFIY GNLSHVSEYA QNLLTMLELY QQELPNPSAA ILEQADEIDL EFLAEDLPKT
LSSMQIGVER IRQIVMSLRT FSRLDEAEMK AVNIHEGIDS TLLILQHRLK AKPETAGIKL
TKKYADIPLV ECYAGQMNQV FMNVLSNAID ALEDYKEAQS KNHHGEIIIF TSFGQIRDNI
QSVVIRIVDN GPGIPEDLRL RICDPFFTTK PVGKGTGLGL SISYKIVVEK HGGVFKCDSQ
LGSGTEFWIE IPIQQVNNNW
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