Gene Ava_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4244 
Symbol 
ID3680892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5322983 
End bp5324437 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content44% 
IMG OID637719592 
Productnitrogenase cofactor biosynthesis protein NifB 
Protein accessionYP_324738 
Protein GI75910442 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR01290] nitrogenase cofactor biosynthesis protein NifB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAC CACCTACAGG ACTTCTAACA TCTGCCACTC CACAAACAAA AACTCAACCC 
AAATCTAATA GTTGTGGTTG TAGCAGCAAA ACAGATACAA CAACTGGTTT AGATGAGAAA
ATCAAGGCGC GGATTGAAAA ACATCCTTGT TATAGCGAAG AAGCACACCA CCACTATGCA
CGGATGCACG TTGCTGTAGC ACCAGCTTGC AACATCCAAT GCAACTATTG TAATCGCAAG
TATGACTGTG CAAATGAAAG CCGTCCTGGT GTAGTTAGTG AATTACTCAC ACCAGAAGAA
GCAGCGCACA AAGTCCTGGT GATTGCTGGC AAAATTCCCC AAATGACTGT ATTGGGAATT
GCCGGGCCTG GAGACCCCCT AGCGAACCCT GAAAAGACTT TCCGCACCTT TGAGTTAATT
GCCGAGAAAG CACCAGATAT CAAACTTTGC CTGTCAACCA ACGGATTAAT GCTTCCCGAT
TACGTCGATC GCATTAAACA ACTCAACATT GATCACGTCA CCATTACTAT TAATATGGTA
GACCCAGAAA TCGGCACAAA GATTTATCCT TGGGTTCACT ATAGGCGCAA ACGCTACAAA
GGCATAGAAG CTGCTCAGAT TCTGCACGAA AAGCAGATGG AAGGATTGCA AGCCCTCCAA
GAAGCAGACA TTCTCTGCAA AGTTAACTCG GTCATGATTC CGGGAATAAA TGACGAACAC
TTAGTAGAAG TTAATCAAGT CATCCGTTCC AAAGGTGCAT TCCTGCACAA CATCATGCCC
CTAATTTCCG CCCCAGAACA TGGTACTCAC TTCGGTTTGA CTGGTCAACG CGGCCCCACA
GCTAAAGAAC TGAAGCAAAT ACAAGATAAC TGTGCTGGCA ATATGAAAAT GATGCGCCAC
TGTCGCCAGT GCCGCGCGGA TGCGGTAGGG TTATTAGGTG AAGACCGCAG TCAAGAATTT
ACTAAAGAAA AATTCATGGA AATGGCTCCA GAGTACAACT TGGAGCAACG CCAAACAGTT
CATGCAGGTA TTGAAAAATC CCAAAAAGAA ATCCAAGTCG TCAAAGAAAA AGTAGTAGAG
ACATTACAGA CAACATCTTT CAACAATAGT CCTAAAATTC TAGTTGCAGT CGCTACTAAA
GGCGGTGGCT TAGTTAACCA ACACTTTGGT CATGCTAAAG AGTTCATGAT TTACGAAGTA
GATGGTAAAA GTGCTAAATT TGTCAGCCAT CGCAAGATTG ACCATTATTG CCAAAGTGGA
TACGGAGAAG AAGCCACTCT CGACAACATT ATTCATGCTA TCTCTGATTG CCAAGCCGTT
TTAGTCTCGA AAATTGGTAA CTGTCCTCAA GAACAATTAC TCAAGGCTGG TTTACAAACA
GTTGAGGCTT ACGACGTGAT TGAAAAGGTG GCTTTGGAAT TTTACGAGAA ATGGATTCTA
GAGGCTAGGG ACTAG
 
Protein sequence
MTPPPTGLLT SATPQTKTQP KSNSCGCSSK TDTTTGLDEK IKARIEKHPC YSEEAHHHYA 
RMHVAVAPAC NIQCNYCNRK YDCANESRPG VVSELLTPEE AAHKVLVIAG KIPQMTVLGI
AGPGDPLANP EKTFRTFELI AEKAPDIKLC LSTNGLMLPD YVDRIKQLNI DHVTITINMV
DPEIGTKIYP WVHYRRKRYK GIEAAQILHE KQMEGLQALQ EADILCKVNS VMIPGINDEH
LVEVNQVIRS KGAFLHNIMP LISAPEHGTH FGLTGQRGPT AKELKQIQDN CAGNMKMMRH
CRQCRADAVG LLGEDRSQEF TKEKFMEMAP EYNLEQRQTV HAGIEKSQKE IQVVKEKVVE
TLQTTSFNNS PKILVAVATK GGGLVNQHFG HAKEFMIYEV DGKSAKFVSH RKIDHYCQSG
YGEEATLDNI IHAISDCQAV LVSKIGNCPQ EQLLKAGLQT VEAYDVIEKV ALEFYEKWIL
EARD