Gene Ava_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4237 
Symbol 
ID3680943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5315646 
End bp5316056 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content35% 
IMG OID637719585 
ProductMerR family transcriptional regulator 
Protein accessionYP_324731 
Protein GI75910435 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.428618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCCC AAACAGAAGC AAAACAAATT GGCGTAGTTG CCAAAGAAAG CGGCGTACCA 
ATTAAAACTA TCCGCTACTA TGAAGAACTT GGTCTACTCA CATCATCAGG CAGAACCGAG
GGAGGATTTA GATTATTTAA CTCTGATGTT TTGGCAAGAC TACACTTTAT TAAACGCGCT
CAAAGTTTAG GATTAAGCTT GTCAGAAATC AAGGAATTTT TAAACGTCCA CGATAGAGGA
CAGTTACCTT GTGAGCATAT CAAAATTAAA CTAGAAGATA AAGTAAAAGC TATTGATGAA
CAAATTCAGC AATTACTAAT TTTGAGACAA GAATTATCAG GATTACTTTC TGGCTGGGAA
ATCAAGCCTG ATAATTCTTC TACAACTATT TGCCCAATTA TTGAAAATTA A
 
Protein sequence
MLAQTEAKQI GVVAKESGVP IKTIRYYEEL GLLTSSGRTE GGFRLFNSDV LARLHFIKRA 
QSLGLSLSEI KEFLNVHDRG QLPCEHIKIK LEDKVKAIDE QIQQLLILRQ ELSGLLSGWE
IKPDNSSTTI CPIIEN