Gene Ava_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4235 
Symbol 
ID3680941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5312877 
End bp5315138 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content46% 
IMG OID637719583 
Productcopper-translocating P-type ATPase 
Protein accessionYP_324729 
Protein GI75910433 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.985979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATG TGACACTCAA GCTACGCGGT ATGAGTTGCG CTTCCTGCGC TAAAAGTATT 
GCAGATACTA TTAATTCTGT CCCAGGTGTC CATGACTGTA GTGTGAACTT TGGGACAGAA
CAGGCAACAG TTAATTATGA CCCCAGAAAA ACGGATTTAC AAGCCATCCA AAACGCAGTG
AATGCAGCAG GTTATTCTGC ATCTCCCCTC CAAGAACAAA ACTTGATGGC GGGAGACGAT
GATGAAGAAA AAAGATATCG TCTGCAAGAA TCCCGTGATT TGCGGCGAAA GGTAACAGTA
GGGGGCATCA TCAGTATCGT GCTGGTGATT GGCTCACTAC CAATGATGAC AGGGTTACAC
CTGCCTAGCA TTCCTACATG GCTGCATAAC CCTTGGCTGC AATTAATCCT CACCACTCCT
GTACAGTTTT GGTGTGGTTA CTCCTTCTAC ATCAACAGCT GGAAAGCTTT CCAGCGCCAT
GCTGCCACAA TGGATACCCT AATTGTTTTA GGTACAAGTG CAGCATATTT CTATTCCCTA
TTCGCAACTT TATTTCCGGG CTTCTTCATC GCCCAGGGAT TGATGCCGGA TGTGTATTAT
GAAACTGCGG CAATTGTCAT TACTTTGATT TTGTTGGGGC GACTGTTCGA GAATCGTGCC
AAAGGACAAA CCTCAGAAGC TATCCGCAAG CTGATCGGTT TACAAGCGAA AACAGCCCGG
TTGATTCGCA ACGGACGAGA AGTAGATGTA CCGATTGAGG AAGTAGAAAT TGGTGATATT
GTGCTGGTTC GTCCTGGGGA AAAAATTCCC GTTGATGGAG AAGTAATTGA CGGGACATCC
ACAATTGATG AAGCGATGGT GACTGGGGAA AGTATACCTG TGCAAAAACA ACCAGGGGAT
GAAGTTATAG GTGCAACTAT CAATAAAACT GGCAGTTTTC AGTTTCGAGC CACCAGAGTT
GGGAAAGACA CTGTACTGGC GCAGATTGTC CAACTAGTGC AGCAAGCCCA AGGCTCAAAA
GCTCCTATTC AAAGACTAGC AGACCAAGTT ACAGGGTGGT TTGTGCCGGC GGTAATTGCG
ATCGCTATTC TCACCTTTAT TATTTGGTAT AACTTCATGG GTAATATCAC CCTGGCATTG
ATGACCACTG TTGGAGTGTT AATTATCGCT TGTCCTTGTG CTTTGGGTTT AGCCACCCCA
ACTTCAGTGA TGGTAGGTAC TGGTAAAGGT GCAGAAAACG GAATTTTAAT TAAAGGCGCT
GAAAGCTTAG AATTAGCGCA CCAAATTCAC ACAATTGTCT TAGATAAAAC CGGCACAATT
ACCCAAGGTA AACCAACAGT TACAGATTTT GTCGCAGTTA ACGGTACTGT TAACAGCAAT
GAAATTAAGC TGATACAGTT AGCCGCATCC CTAGAACGCA ATTCTGAACA TCCCCTTGCA
GAAGCAGTTG TGAGATATGC TCAATCTCAG GAAGTAACTT TAGCAAATGT CACAGACTTT
GCCGCCGTGG TAGGTAGTGG TGTGCAAGGT ATTGTTGCTC ACCATCTTGT GCAGATTGGT
ACACAACGCT GGATGGAAGA ATTAAGTATT AACACTCAAG CTTTGCAGCC AGACAAAGAA
CGCTTAGAAT ATCTGGGTAA AACAGCCGTG TGGTTGGCAG TTGACGGGGA AATTGCCGGA
TTAATGGGAA TTGCTGATGC CATTAAACCC ACTTCCACCC AAGCTATCAG AGCATTGCAA
AAACTTGGTT TAGAAGTTGT CATGCTCACA GGCGACAATC GCCGCACCGC CGCAAGTATC
GCCCGTGAGG TGGGGATTAA AAGAGTGTTA GCAGAAGTCC GTCCCGACCA AAAAGCCGCT
ACAGTCCAAG CAATACAAGC AGAAGGCAAA ATTGTCGCAA TGGTTGGTGA TGGGATTAAT
GATGCACCAG CTTTAGCTCA AGCCGATGTG GGAATTGCCA TTGGTACAGG TACAGATGTG
GCGATCGCTG CCAGTGATAT TACCCTGATT TCTGGCGATT TGCAAGCCAT AGTTACAGCC
ATTCAACTCA GCCGCGCCAC AATTTACAAC ATCCGCCAAA ACCTATTTTT TGCCTTTATT
TACAACGTTG CAGGTATCCC CATCGCCGCC GGGATTCTCT TCCCTATCTT CGGTTGGTTA
CTTAATCCCA TCATCGCCGG TGCAGCAATG GCTTTTAGCT CAGTTTCCGT CGTCACAAAT
GCTCTGCGTT TACGTAAATT TCAACCTAAA ACACCTGCAT AA
 
Protein sequence
MKNVTLKLRG MSCASCAKSI ADTINSVPGV HDCSVNFGTE QATVNYDPRK TDLQAIQNAV 
NAAGYSASPL QEQNLMAGDD DEEKRYRLQE SRDLRRKVTV GGIISIVLVI GSLPMMTGLH
LPSIPTWLHN PWLQLILTTP VQFWCGYSFY INSWKAFQRH AATMDTLIVL GTSAAYFYSL
FATLFPGFFI AQGLMPDVYY ETAAIVITLI LLGRLFENRA KGQTSEAIRK LIGLQAKTAR
LIRNGREVDV PIEEVEIGDI VLVRPGEKIP VDGEVIDGTS TIDEAMVTGE SIPVQKQPGD
EVIGATINKT GSFQFRATRV GKDTVLAQIV QLVQQAQGSK APIQRLADQV TGWFVPAVIA
IAILTFIIWY NFMGNITLAL MTTVGVLIIA CPCALGLATP TSVMVGTGKG AENGILIKGA
ESLELAHQIH TIVLDKTGTI TQGKPTVTDF VAVNGTVNSN EIKLIQLAAS LERNSEHPLA
EAVVRYAQSQ EVTLANVTDF AAVVGSGVQG IVAHHLVQIG TQRWMEELSI NTQALQPDKE
RLEYLGKTAV WLAVDGEIAG LMGIADAIKP TSTQAIRALQ KLGLEVVMLT GDNRRTAASI
AREVGIKRVL AEVRPDQKAA TVQAIQAEGK IVAMVGDGIN DAPALAQADV GIAIGTGTDV
AIAASDITLI SGDLQAIVTA IQLSRATIYN IRQNLFFAFI YNVAGIPIAA GILFPIFGWL
LNPIIAGAAM AFSSVSVVTN ALRLRKFQPK TPA