Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4230 |
Symbol | |
ID | 3680936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5307100 |
End bp | 5308095 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719578 |
Product | ABC transporter-like |
Protein accession | YP_324724 |
Protein GI | 75910428 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.723514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG TTGAACATCT AAGTAAAATC TATGGTTCCA CCCCAGCAAT TACTGATGTG ACTTTTAGTG TCGAACCTGG GGAAATTGTG GGGTTTTTGG GGCCGAATGG GGCGGGGAAG ACGACGACTA TGCGAATTTT GGCTGGTTAT TTACCTGCGA GTAGTGGGAC AGCTAAAATT GCGGGTTTTG ATGTCCATGA AAATTCTTTG GCTGTGCGTC AGCGTATTGG TTATTTACCA GAAACGCCGC CGTTATATAC AGATATGACG GTGGAGGGTT TTCTGCATTT TGTGGCGCGG ATTAAAGGGG TGTCCGCAGG CGATCGCTCT CTCAAGGTAA ACGCAGCGAT CAAACGTTGT AACCTGGAGG ATAGGCGTAA AGTAATTATC CGCAAATTAT CTAAAGGATA TCGTCAAAGG GTGGGTATTG CTCAGGCGAT CGTCCATGAC CCACCAGCAA TTATTCTCGA TGAACCGACG GTGGGACTTG ACCCCAGACA AATTATCGAT GTGCGGAATT TAATTAAAAG CCTCGCAGGA ACCCACACGG TAATTCTCTC TACTCACATT TTGCCAGAGG TGAGTATGAC CTGTAGCCGT GTGGCTATTA TCAATCGCGG TAAGGTGGTA GCTACGAATA CACCAGAAAA TTTGATGACT CAGTTGACAG GTGGCTCAGG TTATGAAATT GAAATTGAGG GGGAATTAGC CCTAGCCAAG CAGGTATTAC AAAAAGTGCC TGGGGTGAGT TTGGTAGAAT CTATTCCTGG TCATCATCTT CCTAGAGAGA ACCGCGCATA CTTACGAGTA TTATCACAAC CGGGAAGCGA CGCAGGTAAA GATATTGCCA CAAGTTTAAT CAGTTCGGGA TTTGGTTTGC ACGAAATGCG CCGTGTCAGC GCTACCCTAG AAGATGTCTT CTTGCAACTA ACCACAGAAG AAAAGAATCT CACATCCCTG AAGGATTCAG CAACCAAAGA AGGAGAAGCA GCGTAA
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Protein sequence | MIEVEHLSKI YGSTPAITDV TFSVEPGEIV GFLGPNGAGK TTTMRILAGY LPASSGTAKI AGFDVHENSL AVRQRIGYLP ETPPLYTDMT VEGFLHFVAR IKGVSAGDRS LKVNAAIKRC NLEDRRKVII RKLSKGYRQR VGIAQAIVHD PPAIILDEPT VGLDPRQIID VRNLIKSLAG THTVILSTHI LPEVSMTCSR VAIINRGKVV ATNTPENLMT QLTGGSGYEI EIEGELALAK QVLQKVPGVS LVESIPGHHL PRENRAYLRV LSQPGSDAGK DIATSLISSG FGLHEMRRVS ATLEDVFLQL TTEEKNLTSL KDSATKEGEA A
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