Gene Ava_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4230 
Symbol 
ID3680936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5307100 
End bp5308095 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID637719578 
ProductABC transporter-like 
Protein accessionYP_324724 
Protein GI75910428 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.723514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAG TTGAACATCT AAGTAAAATC TATGGTTCCA CCCCAGCAAT TACTGATGTG 
ACTTTTAGTG TCGAACCTGG GGAAATTGTG GGGTTTTTGG GGCCGAATGG GGCGGGGAAG
ACGACGACTA TGCGAATTTT GGCTGGTTAT TTACCTGCGA GTAGTGGGAC AGCTAAAATT
GCGGGTTTTG ATGTCCATGA AAATTCTTTG GCTGTGCGTC AGCGTATTGG TTATTTACCA
GAAACGCCGC CGTTATATAC AGATATGACG GTGGAGGGTT TTCTGCATTT TGTGGCGCGG
ATTAAAGGGG TGTCCGCAGG CGATCGCTCT CTCAAGGTAA ACGCAGCGAT CAAACGTTGT
AACCTGGAGG ATAGGCGTAA AGTAATTATC CGCAAATTAT CTAAAGGATA TCGTCAAAGG
GTGGGTATTG CTCAGGCGAT CGTCCATGAC CCACCAGCAA TTATTCTCGA TGAACCGACG
GTGGGACTTG ACCCCAGACA AATTATCGAT GTGCGGAATT TAATTAAAAG CCTCGCAGGA
ACCCACACGG TAATTCTCTC TACTCACATT TTGCCAGAGG TGAGTATGAC CTGTAGCCGT
GTGGCTATTA TCAATCGCGG TAAGGTGGTA GCTACGAATA CACCAGAAAA TTTGATGACT
CAGTTGACAG GTGGCTCAGG TTATGAAATT GAAATTGAGG GGGAATTAGC CCTAGCCAAG
CAGGTATTAC AAAAAGTGCC TGGGGTGAGT TTGGTAGAAT CTATTCCTGG TCATCATCTT
CCTAGAGAGA ACCGCGCATA CTTACGAGTA TTATCACAAC CGGGAAGCGA CGCAGGTAAA
GATATTGCCA CAAGTTTAAT CAGTTCGGGA TTTGGTTTGC ACGAAATGCG CCGTGTCAGC
GCTACCCTAG AAGATGTCTT CTTGCAACTA ACCACAGAAG AAAAGAATCT CACATCCCTG
AAGGATTCAG CAACCAAAGA AGGAGAAGCA GCGTAA
 
Protein sequence
MIEVEHLSKI YGSTPAITDV TFSVEPGEIV GFLGPNGAGK TTTMRILAGY LPASSGTAKI 
AGFDVHENSL AVRQRIGYLP ETPPLYTDMT VEGFLHFVAR IKGVSAGDRS LKVNAAIKRC
NLEDRRKVII RKLSKGYRQR VGIAQAIVHD PPAIILDEPT VGLDPRQIID VRNLIKSLAG
THTVILSTHI LPEVSMTCSR VAIINRGKVV ATNTPENLMT QLTGGSGYEI EIEGELALAK
QVLQKVPGVS LVESIPGHHL PRENRAYLRV LSQPGSDAGK DIATSLISSG FGLHEMRRVS
ATLEDVFLQL TTEEKNLTSL KDSATKEGEA A