Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4228 |
Symbol | |
ID | 3680934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5303874 |
End bp | 5305955 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637719576 |
Product | hypothetical protein |
Protein accession | YP_324722 |
Protein GI | 75910426 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACAATA CGCCTATTAC CACAGTCTAT GTCAACCCAG CAACGGGGAA TGACGCTAAC ACGGGTTCAC GGCAAAGTCC GTTTAAAACC CTGACCCGTG CTTTAAAAGC CACTCCACCA ACGATTGTCC AACTGAGTGC TGGGACTTAT AACACCGCAA ATAAAGAAGT CTTTCCCTTG GTTATTCCTG AGGGGGTAAC GGTGGTGGGG AACGAAGCCA GCAAAGGTGC AGGAATTTTG ATTTCTGGGG GGGGAGAGTA TCAAAGCCCT AGTTTTAGTG TGCAGAATGT CACCTTAGTT TTACTCAGTC AAGCCAGTCT GCGGGGTGTG ACTGTCACCA ATCCTATAGC TAAGGGGACT GGTGTGTGGA TTGAATCAAC TGCACCTAAT ATTGCTAATA ATACTTTTAC TAATTGTGGT CGGGAAGGTG TATTTACTAG CGGTACAGCC AAACCAGCGA TTTTAGATAA TGTGTTTGTG CAGAATACGG CTAGTGGTTT ATTTATGGCA CGTAACAGCA AAGGAGAAGT ATTGCGGAAT GTGTTCCAAA AGAATCCTTT AGGTATCGCT ATCAGTGACT TTGCTGCACC TTTACTCGTT AATAACAAAC TATCAGAAAA TCGGACAGCG ATCGCTCTTT CTCGCAATGC TCGTCCTGTA CTACGTCATA ATTTACTCAT CAAAAATACC CAATGTGGAT TATTAATCAA TGAAAACGCC CTCCCTGACT TGGGTAGCAG CCAAGATACA GCCGGCAATA TTTTTAGTAA TAATGGTGAG TTTGATATAC AAAATGCTAC AACGCAAAAA TTAGTTTCTG TAGGCAATCA GTTAAATCCC ACCCAAGTCA AGGGATTGGT GGAATTTCCC GCCGCCATCA TCGATATTCC CGTACAGTTG GCTAACACTC GTTTTCTTGA CCTAGCTGGA CATTGGGCAA CCGCTTTTGT AGAAGCGTTG GTAAACAAAG GCTTAATGAG TGGCTTTCCC GATGGCACAT TTGCCCCCGA TGCACCAATC ACCCGCGCCC AATATGCGGC GGTGATTGCC AAAACCTTTC AACTCCCCGC CAACAATCAG CCGCCCAAAT TCACCGATAT CAAATCAGAT TTCTGGGCAG CATCAGCCAT CACCAAAGCC GCCCAAATGG GATTTATTAG CGGTTTTCCT GATGGAACCT TTCGCCCCAT GCAGAACTTA AGCAAAGTCC AAGCAATCGT CTCCATTGTC AATGGTCTGA AATTAACTGG AGGTAGCCCC AATGTGTTAA CTGTATACCG CGATCGCGCC CAAATTCCCA GTTATGCCAC AAACCCCCTC GCCGTCGCCA CCCAAAACAG CTTGGTTGTC AACTATCCCC AAACCGATAG ACTAGAACCA CTGCGAGATA TCACCCGCGC CGAGATAGGG GCTTTAATTT ATCAGGCATT AGTAGCTAAT GGGCAAGAAA AAGCCATAGC TTCACCATAT ATAGTCAGCC CTGAAGTTGA TACTTCCTCC TTCACAGACC TGACAGGACA TTGGGCTGAA CCATTCATTC GTGGTTTAGC CAGTATGGGG ATCACCAGTG GTTTTGCTGA TGGTAGCTAT CAACCCAACA AACCCATGAC CCGCGCCCAA TATGCGGCGA TGGTAGCAGT AGCCTTTAAC CCACCAGCTA GAAGACCAGC CACAGATTTT GCTGACGTAC CCAAGAATTT TTGGGCATAC AAAGCCTTAC AAATCGCCGC TAGTGGCGGC TTCGTCAGTG GTTTTAGCGA TCGCACCTTT CGCCCCGACC AAAACGTCCA GAGGCTACAG GTCATCGTCT CTCTAGTTAA CGGATTAGCT CTATCGACAG TTGATAGCAA TAACTTACTC ATCTACACTG ACAATAATAA TATTCCTGAA TATGCTCGCA AAGCCGTGGT TACAGCAACA CAACAGAAAA TTACTGTCAA CTATCCAGAC CCGAAACAGC TAGCACCAAC CAGAGAAGCC ACCAGGGCAG AAGTAGCCGC AATGGTCTAT CAAGCCTTAG TCGCCATACA GAGAGCGCCA AGTATTAATT CACCCTATAT TATTTCGACA GTTAGCAGTT GA
|
Protein sequence | MNNTPITTVY VNPATGNDAN TGSRQSPFKT LTRALKATPP TIVQLSAGTY NTANKEVFPL VIPEGVTVVG NEASKGAGIL ISGGGEYQSP SFSVQNVTLV LLSQASLRGV TVTNPIAKGT GVWIESTAPN IANNTFTNCG REGVFTSGTA KPAILDNVFV QNTASGLFMA RNSKGEVLRN VFQKNPLGIA ISDFAAPLLV NNKLSENRTA IALSRNARPV LRHNLLIKNT QCGLLINENA LPDLGSSQDT AGNIFSNNGE FDIQNATTQK LVSVGNQLNP TQVKGLVEFP AAIIDIPVQL ANTRFLDLAG HWATAFVEAL VNKGLMSGFP DGTFAPDAPI TRAQYAAVIA KTFQLPANNQ PPKFTDIKSD FWAASAITKA AQMGFISGFP DGTFRPMQNL SKVQAIVSIV NGLKLTGGSP NVLTVYRDRA QIPSYATNPL AVATQNSLVV NYPQTDRLEP LRDITRAEIG ALIYQALVAN GQEKAIASPY IVSPEVDTSS FTDLTGHWAE PFIRGLASMG ITSGFADGSY QPNKPMTRAQ YAAMVAVAFN PPARRPATDF ADVPKNFWAY KALQIAASGG FVSGFSDRTF RPDQNVQRLQ VIVSLVNGLA LSTVDSNNLL IYTDNNNIPE YARKAVVTAT QQKITVNYPD PKQLAPTREA TRAEVAAMVY QALVAIQRAP SINSPYIIST VSS
|
| |