Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4224 |
Symbol | |
ID | 3680930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5294696 |
End bp | 5295454 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719572 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_324718 |
Protein GI | 75910422 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.851728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTC TATCATTTTT GAGCATTGAC GACCGCCCCA TTTCGATTGA ACAAACCGTA AAATACCTAC AATCCTCAGG GAAGTTGGGT CAATTTATTA GTGATGTCCT TCGTCAGTAC GTCATTGAGC AAGAAATTCA AGGGCGAGAC GATGTAGAAA TCAATCCGGC ATTAACTGAA CAAACAGTGA TTGATTTTCG CCTAAAAAAT CAACTCGCTG ACCCCCAAGC TTTTCAAGAC TGGTTAACTA ACAATGGTAC GGACTATGCC AGATTCCATG CCTCAATTAC TTTTAACTTT AAATTAGAAA AATTGAAAAC CTTAGTGACA GAAGCTAAAC TCCCAGAATA TTTTATTGAG CAGAAAATCT TTTTGGATCG GGTGGTAATA TCGCGGATTG TGGTTGATAG TCGAGAACTG GCAGAGGAAT TACAACTGCA AATTGCAGAA GGGGGCAGTT TTGAACAATT AGCTAAAGAG TATTCTGTAT TAGACGATCG CCTGGTTAAT GGCATGATGG GGCCAATTAG TCGGGGAACT ATGCCAGACA AATTACGGGC TGCTATTGAT GTGGCTACTC CTGGTCAATT AGTCGGGCCT ATAGAAATTG ATGGACGTTA TGGTTTGTTT CGGGTGGAAC AGTTTCTACC AGCGTCTTTA GATGATATTC AACTCAAGCA AGCGTTACAA AACGAACTAT TTGAAAAATG GTTAGCAGAG AAAATTCAAA AGCTGACGGT GAAATTACAA GTGAGTTAA
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Protein sequence | METLSFLSID DRPISIEQTV KYLQSSGKLG QFISDVLRQY VIEQEIQGRD DVEINPALTE QTVIDFRLKN QLADPQAFQD WLTNNGTDYA RFHASITFNF KLEKLKTLVT EAKLPEYFIE QKIFLDRVVI SRIVVDSREL AEELQLQIAE GGSFEQLAKE YSVLDDRLVN GMMGPISRGT MPDKLRAAID VATPGQLVGP IEIDGRYGLF RVEQFLPASL DDIQLKQALQ NELFEKWLAE KIQKLTVKLQ VS
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