Gene Ava_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4221 
Symbol 
ID3680927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp5292413 
End bp5293120 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID637719569 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_324715 
Protein GI75910419 
COG category[I] Lipid transport and metabolism 
COG ID[COG0170] Dolichol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.030183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAAACT TAGTTTCCGA ATTAATCTCA ACACCGCCTT TATGGCTGCA AATTAGTATT 
GTTGCAGCTT GGGTATCCTT TATTCTGGCG ATCGCTGGGC TGGTAAATCG CTTTGCCACT 
AGCGACTCGG AAATAGTCCG AAAAATAGTT CACATTGGCG CTGGCCATGT GATTTTACTG 
GCTTGGTGGT TAGATATTCC TGCCAGTGTA GGCATTGGTG CTTCCATTGT GGCAAGTGTA 
GTCACTCTGT TGTCTTACAT TTTCCCACTT CTCCCAGGTA TTAATAGTGT GGGTAGACAG 
AGCTTAGGCA CATTTTTTTA CGCTGTCAGT GTCGGCGTTT TAGTGGCTTG GTTTTGGCAT 
ATACAACAAC CCCAATATGC GGCGATCGGC ATGATGGTAA TGGCCTGGGG TGATGGATTA 
GCGGCTTTGG TTGGACAGCG ATTTGGTAAG CATAAATATA AACTTTTAGG AGCGCAAAAA 
AGCTGGGAAG GCTCCTTAAC TATGGCTTTA GCTAGCTACT TAGTATGTAG CTTAATTTTA 
CTTGGTGTAC TAGGCAACGT TTGGCAGACT TGGACTGTAT CACTAGCGGT GGCTTTTGTC 
GCCACTAGTT TAGAAGCCTT TTCCTTCTTG GGGGTTGACA ATTTGACTGT GCCTTTGGGT 
AGTGCTGCCA TAGCATTTGC ACTAATTCAA TTTTGGCCAC TGCATTAA
 
Protein sequence
MLNLVSELIS TPPLWLQISI VAAWVSFILA IAGLVNRFAT SDSEIVRKIV HIGAGHVILL 
AWWLDIPASV GIGASIVASV VTLLSYIFPL LPGINSVGRQ SLGTFFYAVS VGVLVAWFWH 
IQQPQYAAIG MMVMAWGDGL AALVGQRFGK HKYKLLGAQK SWEGSLTMAL ASYLVCSLIL 
LGVLGNVWQT WTVSLAVAFV ATSLEAFSFL GVDNLTVPLG SAAIAFALIQ FWPLH