Gene Ava_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4215 
Symbol 
ID3680959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5285948 
End bp5286670 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID637719562 
Product6-phosphogluconolactonase 
Protein accessionYP_324709 
Protein GI75910413 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0227099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CGGTTGAAGT CCTACCGGAT CAAACAGCGC TAATTGCGCG ATCGCTCGAT 
TTGATCCTGA CTAAGTTAGA TACTGCCATA AAACAGCAGG GGCGATTTAC CATTGCCTTA
TCCGGCGGTA GCACACCTAA GCCGTTGTAT GAAGCGATCG CTGCCCAAAA ATTACCTTGG
GATAAAATTC ATGTTTTCTG GGGAGATGAA CGTTATGTCT CGCCAGATCA TCCCGATAGT
AATGAACTGA TGGCCCGTAC TGCATGGCTA GACCGCGTTG ATATCCCCGC CGAGAATATT
CATGCTGTCC CCACTTTAGA TAATAATCCG GCAGTATCGG CTGCTAAGTA CGAACAGCAA
TTGCAAGCAT TTTTTAACTC TGCACCCGGA GAGTTTCCCG CTTTGGATGT GGTATTGCTA
GGCATGGGTG ATGATGCCCA TACTGCATCT TTGTTTCCCC ACACAGAAGC TTTACAAGTA
CGCGATCGCT TAATTACTGT GGGTAATAAA GACGGCAACC CCCGCATAAC CTTCACATAC
CCATTCATTA ACGCTGCTCA CAGTGTAATT TTTGTGGTTG CAGGTGCTAA CAAACGGCCA
GCCCTTGCTC AAGTATTTGC TCCGAGTGCA GATGACTTAG CTTATCCATC CCGCTTAATT
CGGCCGCAAG GTGAACTTTT GTGGCTATTG GATGCAGCCG CAGGCGCGGA ACTCTCAGTT
TGA
 
Protein sequence
MKKTVEVLPD QTALIARSLD LILTKLDTAI KQQGRFTIAL SGGSTPKPLY EAIAAQKLPW 
DKIHVFWGDE RYVSPDHPDS NELMARTAWL DRVDIPAENI HAVPTLDNNP AVSAAKYEQQ
LQAFFNSAPG EFPALDVVLL GMGDDAHTAS LFPHTEALQV RDRLITVGNK DGNPRITFTY
PFINAAHSVI FVVAGANKRP ALAQVFAPSA DDLAYPSRLI RPQGELLWLL DAAAGAELSV