Gene Ava_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4212 
Symbol 
ID3680956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5282348 
End bp5283166 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content46% 
IMG OID637719559 
ProductDelta-9 acyl-phospholipid desaturase 
Protein accessionYP_324706 
Protein GI75910410 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTG CTACTTCAAC TAAACCTCAA ATCAATTGGG TAAATACCCT ATTTTTCCTT 
GGGCTACACA TCGGCGCTTT GTTTGCCTTT GTCCCTGGTA ATTTCAGCTG GGCGGCAGTT
GGTGTGGCTT TATTGCTTTA CTGGATCACT GGTGGTTTGG GTATTACCTT AGGCTTTCAT
CGCCTTGTCA CCCACCGCAG TTTTCAGACT CCCAAGTGGT TGGAATATTT CCTAGTGCTT
TGCGGGACTC TTGCCTGTCA AGGAGGGCCA ATCGAGTGGG TCGGGACACA TCGCATTCAT
CATTTACATT CCGATACTGA CCCAGATCCC CATGATTCTA ATAAAGGTTT CTGGTGGAGC
CATATTGGTT GGCTAATTTA TCACTCTCCC TCCCACGCTG ATGTTCCTCG GTTCACCAAA
GATATTGCCG AAGACCCAGT TTATCAGTTT TTACAGAAAT ATTTCATTTT TATCCAGATT
GCTCTGGGGT TGTTGCTGTT ATATCTGGGC GGCTGGTCTT TTGTAGTCTG GGGAATTTTC
TTTCGCATCG TCTGGGTTTA CCACTGTACT TGGTTGGTAA ACAGCGCTAC CCATAAATTT
GGCTACCGCA CCTATGATGC CGGAGACAAA TCTACTAACT GTTGGTGGGT AGCTGTACTA
GTGTTTGGCG AAGGCTGGCA CAACAACCAC CACGCTTTTC AATATTCAGC TCGTCACGGG
TTGGAATGGT GGGAAGTTGA TCTGACTTGG ATGACGGTGC AATTGCTGCA AGTACTTGGT
TTAGCAACTA ATGTCAAACT AGCAGACAAA AAGCAGTAA
 
Protein sequence
MTIATSTKPQ INWVNTLFFL GLHIGALFAF VPGNFSWAAV GVALLLYWIT GGLGITLGFH 
RLVTHRSFQT PKWLEYFLVL CGTLACQGGP IEWVGTHRIH HLHSDTDPDP HDSNKGFWWS
HIGWLIYHSP SHADVPRFTK DIAEDPVYQF LQKYFIFIQI ALGLLLLYLG GWSFVVWGIF
FRIVWVYHCT WLVNSATHKF GYRTYDAGDK STNCWWVAVL VFGEGWHNNH HAFQYSARHG
LEWWEVDLTW MTVQLLQVLG LATNVKLADK KQ