Gene Ava_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4210 
Symbol 
ID3680954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5279614 
End bp5280693 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content41% 
IMG OID637719557 
ProductFatty acid desaturase 
Protein accessionYP_324704 
Protein GI75910408 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.762153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATCAA CTACAATCCC CTCCGATAAT TCTCCTAGCT TTGACCAATC AGAGAATACA 
ACTACGCTGC CATTTACTCT TCAGGATTTA AAAGCAGCTA TTCCGGCTGA ATGTTTTCAA
CCAAACGTGG GCAAATCACT GTTTTACTTT TTTCGTGATG TAGTGATTGT TAGCTCACTA
TACGCAGTTG CTCATTACCT AGATTCTTGG TATTTCTGGC CAATTTTCTG GTTAATGCAA
GGAACGATGT TTTGGGCTTT GTTTGTGGTT GGACATGACT GCGGACACCA ATCTTTTTCT
AAGCATAAAT GGCTCAATGA TTTAGTTGGG CATCTGACTC ACACCTTCAT ATTAGTCCCT
TATCACGGTT GGCGTATTAG TCACAGAACT CATCACAAAA ATACTGGCAA TATCGATAAT
GATGAAAGCT GGTATCCTGT GACTGAGTCG CAATACAAGG AAATGCCATT AGGGCAAAAG
ATAGGCCGTT ATTACGTCTT TCTACTGGCT TATCCAGTGT ATTTGTTTAA GCGTTCTCCT
AATAAGGAAG GCTCTCATTT TTTACCTAGT AGCCCTCTTT TCAAGCCATC AGAAAAATGG
GATGTCATCA CCAGCACTGT ACTGTGGACT TGTATGGTTG CTTCGTTAGG TTTCCTAACT
TATCAATGGG GCTGGATGTG GTTGTTAAAA TACTACGCTG CACCATATAT CGTGTTTGTA
ATCTGGCTTG ATTTAGTCAC ATTCCTACAC CACACTGAGG CAGATATCCC CTGGTATCGT
GGCGAAGATT GGACTTTCCT CAAAGGTGCA ATTTCTAGCA TTGACCGCAA TTATGGTTTA
GTCAATCATA TCCATCATGA TATCGGCACT CATGTAGCAC ACCACATTTT CTTGAATATC
CCTCACTATA ATTTGCTGAA GGCTACCGAG GCTATTAAAC CAGTCATGGG TGAATATTAC
CGCAAGTCAG AAGAACCTAT TTGGAAGTCA TTGTGGCGTT CTTGCGTGAG TTGCCATTTT
GTCCCCGATA CTGGTGGGAA AGTTTACTAC ACTTCTAACA ATCAAGTAGT GAATAAGTAG
 
Protein sequence
MQSTTIPSDN SPSFDQSENT TTLPFTLQDL KAAIPAECFQ PNVGKSLFYF FRDVVIVSSL 
YAVAHYLDSW YFWPIFWLMQ GTMFWALFVV GHDCGHQSFS KHKWLNDLVG HLTHTFILVP
YHGWRISHRT HHKNTGNIDN DESWYPVTES QYKEMPLGQK IGRYYVFLLA YPVYLFKRSP
NKEGSHFLPS SPLFKPSEKW DVITSTVLWT CMVASLGFLT YQWGWMWLLK YYAAPYIVFV
IWLDLVTFLH HTEADIPWYR GEDWTFLKGA ISSIDRNYGL VNHIHHDIGT HVAHHIFLNI
PHYNLLKATE AIKPVMGEYY RKSEEPIWKS LWRSCVSCHF VPDTGGKVYY TSNNQVVNK