| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4198 |
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| Symbol | |
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| ID | 3681001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5257970 |
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| End bp | 5260552 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719545 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_324692 |
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| Protein GI | 75910396 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.116621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCT TCACTCTCAA AATTGCATCA CTTACTTTCT GGAAGTCTAT TCATCTCCGT
CTCAATTTTA CTCACTCAAA AAAACAATTC ATTCATATGA AACGTTGGTT ATTAGCTAAC
TTAATTGCTC TTTGCTCGTT TTTGTTCTTA GGAACAAACG CTGCTTGGGC AGTCGGTGGT
GGCATTGCGC CGGGCGCACC GGGTGTTTCC TCTGTTTGGT CTTATGCTGG TAAGCAAGGC
ATTGGAACAT CCTATGAACA GTATGTGGAT AATAAATATA GCGATCGCGC TCCTACAAAT
GCCATCTCCA AGGTTTGGTT TTCAATTGCT CAAGGTATTG TGACAGAAAC CGCCTATGGA
GAAATCGATC GCGCCCAGAT CAATGACTTA CAATTCTTAG TCACAGGCAA CGGTTTTTTT
GATGAAGAGA AGGTTTCTAC CACCAGTAAG GTGGACTATC TAGATAAAGA TAAGGATGGA
AGGCCTCTTT CTCCTGCTTA TCGTGTGATC AATAAAGATA AAGATGGTAA ATACACCATT
GAAAAGCACA TCTTTACCGA TCCTGATCAC CAAACTTTGT TTACAAAAGT GATCTTTACT
GCCAAAGAGG ATAACGTTAC CCCCTACATT CTGATTAATC CTCACATGAA TAATACTGGC
AAAGAAGATG TAGCTTTTGT TAAAAGCGAT AGTCTCAATG CTAGGGAAGG AGAAATTGTT
TATCTAAGTT TGAAGAGTTC ATTGCCTTTT GTGAAAACCT CAGCCGGATA CGTAGCTCGT
AGTGATGGCT ATCAAGATTT AAAAGACAAT GGGGTGATGG ACTGGACTTA TGACTACACT
GATCAGAGCA AGCCGGGGAG TGTAGCTATG ATAGGTCAAC TGCCTACCCT CAATAAAGGA
CAAACTTCCA CCTTTAACAT TGCTGTAGGC TTTGGCAGCA CCTATCAAGA AGCAACCGAA
CAAGTCGATG CTTCTTTAAA AGAAGGGTAC GAAAGTCTGT TAGCAAAATA CAACGGTAAA
GGCAGCGCCG TAGGCTGGGA AGATTATCTA GCCAGTCTTA AAAATCTACC TGCCATGATT
GCCAACACCG GTGACAAGGG TAAACAGCTT TATGCCAGTG CTTTCACCCT CAAGAGTATG
GAAGATAAAG AAAATCCTGG GGCTTTAATT GCTTCTTTAT CCGTTCCTTG GGGAGATACT
GTGAACGCAG ACACATTTGC CACAGGCTAT CGAGCAGTTT GGCCGAGAGA CTTTTATCAA
GCAGCTATGG CTTTGTTAGC TTTAGGAGAT AAAGAAACTC CCCTAACGGC TTTTAAATAC
CTTCCACAAG TGCAAGTGCA ATCAGATACA CCAGGTAACG CTGGGGCTAC AGGCTGGTTT
TTACAAAAAA CTCACGTTGA TGGAACCTTA GAATGGCTGG GAGTGCAGTT AGATCAAACT
GCCATGCCGA TTATGTTGGG CTGGAAACTT TGGAAAGCCG GAGTGTTGTC GGATGGTGAA
ATCACTGAGC AATATCGCAC GATGTTGAAA CCTGCCGCAG AATTTCTGGC TAATGGCGGT
AATGTCAATA TACATACCTC TGATCAAGCA AACAACCGCA AGATAAACCC ACCAAGCACT
CATCAAGAAC GATGGGAAGA ACAATCAGGA TATTCCCCCT CTACAACGGC TGCGATTATT
ACTGGGTTAG TTGCGGCGGG TGATATTGCT GAAAATGCAG CTGATGATCC TCTTGCAGCA
AAATATTATT TCAGTAAAGC AGATGAATAT CAAAAGAATG TGGATAAATT TATGTTTACC
ACAACTGGAG ATATTAAGAA CTGTAATAGC TCCAGTGAAT ATCTCCTGAG AGTTACCCCT
AATGCAGATC CTAACGATGG AAGTCGCATC CACGACAACA ATAGTTTGCT GGAAGCGGAT
GAACGCCAGA TTTTAGATGG TGGTTTCTTG GAATTGGTAC GTTATGGAGT CAGAAAGGGA
GATGATGCTC ACATTGCTGC CAGTGTTTGC GCCTTGGATA ATATCAGCCT CTCAGAAGAT
TTAAGGGTGA GGTACGACAT ACCTTTTGAT GGGAAAAAGT ATCCAGGATT CCGACGCTAT
GGCAATGATG GCTATGGTGA ACAAATCAAC GATGGTAGTA ACTTTCGGGA TATTGACGAT
GGCCAGAAAA AACTCCGCAG AGGTAGGATT TGGCCGTTCT TCACTGGTGA GCGTGGTCAT
TATGAACTTG AGTTAGCTAA GGCCAAAAAT GGAGGCACTA TTAGCGATCA AGATGTTGCT
AAACTACGTG ATACTTATGT ACGAGCAATG GAATATTTTG CTAACGAAAG TCTCATGCTT
CCTGAACAAG TATGGGATGG TGTTGGCGAG AATAAGGCTC ATAATTACAT CACTGGAGAA
GGAACGAATA GCGCCACACC TTTAGCTTGG GCGCACGCCG AATATATTAA GTTAGTCAAA
TCATTGACTG ATAAGAATGT TTGGGATTCC TACCCCATTG TTCAGGCAAG ATACCAATCT
TCGGAATCTC TTACTGCCTC AAGTTCTCAT CCGAACGGCA CTAAGATCAG CGCAAATCCT
TAA
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| Protein sequence | MMIFTLKIAS LTFWKSIHLR LNFTHSKKQF IHMKRWLLAN LIALCSFLFL GTNAAWAVGG
GIAPGAPGVS SVWSYAGKQG IGTSYEQYVD NKYSDRAPTN AISKVWFSIA QGIVTETAYG
EIDRAQINDL QFLVTGNGFF DEEKVSTTSK VDYLDKDKDG RPLSPAYRVI NKDKDGKYTI
EKHIFTDPDH QTLFTKVIFT AKEDNVTPYI LINPHMNNTG KEDVAFVKSD SLNAREGEIV
YLSLKSSLPF VKTSAGYVAR SDGYQDLKDN GVMDWTYDYT DQSKPGSVAM IGQLPTLNKG
QTSTFNIAVG FGSTYQEATE QVDASLKEGY ESLLAKYNGK GSAVGWEDYL ASLKNLPAMI
ANTGDKGKQL YASAFTLKSM EDKENPGALI ASLSVPWGDT VNADTFATGY RAVWPRDFYQ
AAMALLALGD KETPLTAFKY LPQVQVQSDT PGNAGATGWF LQKTHVDGTL EWLGVQLDQT
AMPIMLGWKL WKAGVLSDGE ITEQYRTMLK PAAEFLANGG NVNIHTSDQA NNRKINPPST
HQERWEEQSG YSPSTTAAII TGLVAAGDIA ENAADDPLAA KYYFSKADEY QKNVDKFMFT
TTGDIKNCNS SSEYLLRVTP NADPNDGSRI HDNNSLLEAD ERQILDGGFL ELVRYGVRKG
DDAHIAASVC ALDNISLSED LRVRYDIPFD GKKYPGFRRY GNDGYGEQIN DGSNFRDIDD
GQKKLRRGRI WPFFTGERGH YELELAKAKN GGTISDQDVA KLRDTYVRAM EYFANESLML
PEQVWDGVGE NKAHNYITGE GTNSATPLAW AHAEYIKLVK SLTDKNVWDS YPIVQARYQS
SESLTASSSH PNGTKISANP
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