| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4194 |
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| Symbol | |
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| ID | 3680997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5252222 |
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| End bp | 5253226 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637719541 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_324688 |
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| Protein GI | 75910392 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00304718 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAAC TACCTGCAAC ATCTGATATT TACATCAGCT TTTTCATGTT TACCACCAAT
TTGCAACCCG ATAACTTGGA TTATCGGCGA ATTGTGGTAG CTCATATTAA GAAACTACAA
AGATTTGGTT ATAGTGGGTT TGAATTTCCC ATTGCTCCTG GACTTCCTGA AAATTATGCC
CAAGATTTAG AAAATTACAC GAATCTACGC CATTATTTGG ACAGTGAAGG GTTAGAAAAT
GTGAAAATTT CTACTAACGT GGGAGCTACC CGCACCTTTG ACCCTTCTTC TAACTATCCA
GAACAGCGAC AAGAAGCCCT AGAGTATCTG AAGTCACGGG TTGATATCAC CGCAGCCTTA
GGGGGTGAAA TTATGATGGG GCCAATTGTC ATCCCTTATG GTGTTTTTCC GACAACAGAC
TTCAACGAGC CTATCTGGAG TGATGAACTT CAAGAACATC TCAAAGTTCG TTATGCTAAT
GCCCAACCTA TTCTGGATAA GTTAGGTGAA TACGCAGAGA TCAAAAAAGT TAAATTAGCC
ATTGAACCGA TAACCCATTG GGAAACACCA GGCCCCAACA AATTATCTCA ATTAATCGAG
TTTCTCAAAG GCGTTAAGAG TAAACAAGTG GGAGTAGTCA TTGATAGCGC CCACGAAATT
TTGGATGGCG AGGGGCCGGA GATATTTAAA ACACAAGTGG AGTACCTTGC TCAACAAGGA
AGACTGCACT ATGTCCAAGT CTCTCCTCCA GACCGGGGCG CTCTTCATAC CAGTTGGCTT
CCTTGGAAAT CTTTTTTAAC ACCCATTGTC AAAGTTTATG ACGGCCCGAT CGCCGTGGAA
ATTTTCAATG CTATCCCTGC TTTTACCAAT TCACTACGTC TGACTCGACG TAAATTTTGG
ATACCTGATG AAGATCCTCC AAATCAATAC CCCAATGCTT ACGATATTGC TGATGAAGCC
ATCAAGGTAA CTCGAAAAGA ATTAAAGAAA ATTGGCTCTA AATAG
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| Protein sequence | MTKLPATSDI YISFFMFTTN LQPDNLDYRR IVVAHIKKLQ RFGYSGFEFP IAPGLPENYA
QDLENYTNLR HYLDSEGLEN VKISTNVGAT RTFDPSSNYP EQRQEALEYL KSRVDITAAL
GGEIMMGPIV IPYGVFPTTD FNEPIWSDEL QEHLKVRYAN AQPILDKLGE YAEIKKVKLA
IEPITHWETP GPNKLSQLIE FLKGVKSKQV GVVIDSAHEI LDGEGPEIFK TQVEYLAQQG
RLHYVQVSPP DRGALHTSWL PWKSFLTPIV KVYDGPIAVE IFNAIPAFTN SLRLTRRKFW
IPDEDPPNQY PNAYDIADEA IKVTRKELKK IGSK
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