Gene Ava_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4192 
Symbol 
ID3680995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5251208 
End bp5251597 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID637719539 
Producthypothetical protein 
Protein accessionYP_324686 
Protein GI75910390 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.586568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00703334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGC ATGATCAAGA TCAAATCAGA CGCATATTTG AAGAAGTATA TCCTGATAAT 
GTCCGGGCGG GAGATTTATC TGCTTATGCC GATATGTATA CAGAAGATGC TTTATGGATG
CCACCTAATG GACTCGATCG CTGCGGTATA CCGGATATTT TAGAAGGCTT TGCAGACACA
ATTGCTGATA AAGATATCGA TCCGATTTTT ACAGCTGAAG AAATCGAAGT CAAAGGTGAT
TCTGGTTATG TCATCGGTAT TTCTTTGGCT ACCATTTGCC CAAAAGACGG CAGTCCATCA
ACACAAGTCA AATATCGAGC TTTATGGTTG ATGAAAAAAG ATGGCGATCG CTGGAAAATT
GCTCGTCAAA TTTGGAATGT AAAACCTTAA
 
Protein sequence
MKLHDQDQIR RIFEEVYPDN VRAGDLSAYA DMYTEDALWM PPNGLDRCGI PDILEGFADT 
IADKDIDPIF TAEEIEVKGD SGYVIGISLA TICPKDGSPS TQVKYRALWL MKKDGDRWKI
ARQIWNVKP