Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4185 |
Symbol | |
ID | 3680988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5241956 |
End bp | 5242732 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719532 |
Product | hypothetical protein |
Protein accession | YP_324679 |
Protein GI | 75910383 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00105549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCCGTC AACAATTATC ACATAGGCAA CAAAAAATTT TTCTCTGCAT CTTGACCACG GTCTTTTATT TGAGTTTTCT GTCCCCTGTT TTTCTTCAGC CAGCCCAAGC ACAAAACGTA TTTGAGCGTA TTGGTCGGCT GTTTAGCAAT TCCCGACCAG AGGGGAATGC TTCTGGACGT TCACGGGGAG GGGCGACGCG ATCGCAATGC TCTCAAATAG ATAAAAATAC CCTGATCGCA TTAGTTCCCC AGAGCAATGA AGGCTTGACT ACTCAGGATC ATCCTCAGTT CTTATTCTAT TTACCTTTTG GTGGATCTTC CCAGTCTCCT CCAGCCAAAT TTAGGTTATT AAATGAACAG AAAAAGTCTG TTTTGACCAA GCCTCTACCA TTTTCTTTAC CAGAAACAAA AGGTATCGTC AGTATTACTC TTCCTGCTAC CGAAAAACCC CTATTGATTG GACAAAGATA TCATTGGTAC CTCAACATCA CTTGTGTGAA TGAGCAGGGA CTTAACACAA ATATTAGTGT AGATGGTTGG ATTAAACGAG TTGAAGCGGC TTCTCAGAGG GTAGTGCCAA TCAAGCACAT AGGATATCAA TCACAGTACA TTCCTTATGC GGAAAATAAT ATTTGGTATG AAACTGTTAG TAAAATTGCT ACAAATCGCG CTACTCATCA GCAAGAATGG TCTAGTTTAT TAGCATTATT TGAACTTGAA GAATTTGCTA CTTCTCCCAT TTATGAACTC AAATTGCAAC AGCCTTCAAC ACTATAA
|
Protein sequence | MIRQQLSHRQ QKIFLCILTT VFYLSFLSPV FLQPAQAQNV FERIGRLFSN SRPEGNASGR SRGGATRSQC SQIDKNTLIA LVPQSNEGLT TQDHPQFLFY LPFGGSSQSP PAKFRLLNEQ KKSVLTKPLP FSLPETKGIV SITLPATEKP LLIGQRYHWY LNITCVNEQG LNTNISVDGW IKRVEAASQR VVPIKHIGYQ SQYIPYAENN IWYETVSKIA TNRATHQQEW SSLLALFELE EFATSPIYEL KLQQPSTL
|
| |