Gene Ava_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4185 
Symbol 
ID3680988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5241956 
End bp5242732 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content40% 
IMG OID637719532 
Producthypothetical protein 
Protein accessionYP_324679 
Protein GI75910383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00105549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGTC AACAATTATC ACATAGGCAA CAAAAAATTT TTCTCTGCAT CTTGACCACG 
GTCTTTTATT TGAGTTTTCT GTCCCCTGTT TTTCTTCAGC CAGCCCAAGC ACAAAACGTA
TTTGAGCGTA TTGGTCGGCT GTTTAGCAAT TCCCGACCAG AGGGGAATGC TTCTGGACGT
TCACGGGGAG GGGCGACGCG ATCGCAATGC TCTCAAATAG ATAAAAATAC CCTGATCGCA
TTAGTTCCCC AGAGCAATGA AGGCTTGACT ACTCAGGATC ATCCTCAGTT CTTATTCTAT
TTACCTTTTG GTGGATCTTC CCAGTCTCCT CCAGCCAAAT TTAGGTTATT AAATGAACAG
AAAAAGTCTG TTTTGACCAA GCCTCTACCA TTTTCTTTAC CAGAAACAAA AGGTATCGTC
AGTATTACTC TTCCTGCTAC CGAAAAACCC CTATTGATTG GACAAAGATA TCATTGGTAC
CTCAACATCA CTTGTGTGAA TGAGCAGGGA CTTAACACAA ATATTAGTGT AGATGGTTGG
ATTAAACGAG TTGAAGCGGC TTCTCAGAGG GTAGTGCCAA TCAAGCACAT AGGATATCAA
TCACAGTACA TTCCTTATGC GGAAAATAAT ATTTGGTATG AAACTGTTAG TAAAATTGCT
ACAAATCGCG CTACTCATCA GCAAGAATGG TCTAGTTTAT TAGCATTATT TGAACTTGAA
GAATTTGCTA CTTCTCCCAT TTATGAACTC AAATTGCAAC AGCCTTCAAC ACTATAA
 
Protein sequence
MIRQQLSHRQ QKIFLCILTT VFYLSFLSPV FLQPAQAQNV FERIGRLFSN SRPEGNASGR 
SRGGATRSQC SQIDKNTLIA LVPQSNEGLT TQDHPQFLFY LPFGGSSQSP PAKFRLLNEQ
KKSVLTKPLP FSLPETKGIV SITLPATEKP LLIGQRYHWY LNITCVNEQG LNTNISVDGW
IKRVEAASQR VVPIKHIGYQ SQYIPYAENN IWYETVSKIA TNRATHQQEW SSLLALFELE
EFATSPIYEL KLQQPSTL